Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2818 ATGAGGATCCGCAAGAACGCGAAGCTTTCCCCTCTTCTGTTCTCGTCGTGTTTGCAAGGTGGTTCGGTTCCGGTGGAGACCCACGTGTGCCAGCTGAACCAGTCTCCATGGGATGTGATCCCCTTTGACTCCGACTCGATCCAGTTCCAACCCGACGACAGCTTCACCGCGGGAAACAATGGCAGCGCGGGCGATTCCTTCGGCGCCGTCGAAAGCAGCGTCGCGTCGATGATGGACGCGGATAAGACGGAACACACAACCACGAGGACGATAATGGCGGATAATAATAGTAAGGTGGCGCCGAATAACGGCGCCACCTCTCTGGCCAGCCCTTGCCTTGGATTCGATGGCAAGGGCTGGCCATGTAAGAACGAAGCCAAGCAAGGGCAATCGTTTTGCGAACAACACTTGTCTTTGTCTCTGCCCGCTTCATACAACAACAAGAAATCACAAGCTCAAGCACAAGCTCGTCGTGCCAAGACCCGCGGCGCCGGCAAGAAGGCGGCGGCGGGGGCGAGCTCGAACCCGTATGAATTCTACTACTACTCCGGGTTCGGGCCGCTGTGGGGGAAGCGGAGAGGTGACAGAAACGGAGAAGGGAGCAGGAACGGTGTGAATTCGACAATGGTGGGGTCCGATAACGCAGTGGCGGGTACAGACGACGTTGTCGATGATGATATTAATGATAGTGTTGTCCCGAGTGGTGTCGCGGTTGTTCCTTCTGTTTCGGAGATGGACAATGAGGGGATTATCGATTACGAGGATGATGACGAAGAAGAGGTCGACGACGATAGCGGGAAGAAACGAATGAGGAAGCCCGTGAAAGCGAGGTCGCTGAAATCGCTGATGTGA 852 0.5563 MRIRKNAKLSPLLFSSCLQGGSVPVETHVCQLNQSPWDVIPFDSDSIQFQPDDSFTAGNNGSAGDSFGAVESSVASMMDADKTEHTTTRTIMADNNSKVAPNNGATSLASPCLGFDGKGWPCKNEAKQGQSFCEQHLSLSLPASYNNKKSQAQAQARRAKTRGAGKKAAAGASSNPYEFYYYSGFGPLWGKRRGDRNGEGSRNGVNSTMVGSDNAVAGTDDVVDDDINDSVVPSGVAVVPSVSEMDNEGIIDYEDDDEEEVDDDSGKKRMRKPVKARSLKSLM 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2818 283 PANTHER EXPRESSED PROTEIN 1 283 - -
Ssu4g2818 283 MobiDBLite consensus disorder prediction 148 170 - -
Ssu4g2818 283 ProSiteProfiles WRC domain profile. 106 152 IPR014977 -
Ssu4g2818 283 MobiDBLite consensus disorder prediction 200 214 - -
Ssu4g2818 283 MobiDBLite consensus disorder prediction 245 283 - -
Ssu4g2818 283 MobiDBLite consensus disorder prediction 248 262 - -
Ssu4g2818 283 PANTHER EXPRESSED PROTEIN 1 283 - -
Ssu4g2818 283 MobiDBLite consensus disorder prediction 194 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2818 Ssu-Chr4 71778303 71779497 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2818 - - ccaj:109798599 316.62