Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2779 ATGTACCACCAACCCAGATCCCCAACCCCAACCCCAGCCTTCTCTTCCCTCTTCACCCCAAAATGCCCTTTCAATATCAACCGGAAGCTCTTCCTCCTCGTCCCCTCGAAGCCCAACAAACCCCCCACCAGGGCCTCCCTCCCTCGCCCCTCCTCGGGCCCGGCCCAGGCCCTGATCTCCCTCCTCCGCTCCGTCCCGGACTGGGCCGACACCGTGCAGGAGCGGGGCATGCAGAAGAGACGCTCCCTCTACACCCACCTCAACTGGCGCGACCACCGCAGCTCCCTCCGCCACCTCCGCCACGTCCTCTCCAGCCTCTCCTCCCGCGTCATCCTCTCCCTCGTCCCCCCCGTCCTCTTCTTCACCGCCTTCGCCGCCGCCATCGCCGCCTACAACTCCGCCGTGATCCTCCACCTCCTCCCCGAGTTCCTCCCGCTCCTCAGGGCCTCCACCCTCCCCTACCAGCTCACCGCCCCCGCCCTCGCCCTCCTCCTCGTCTTCCGCACCGAGGCCTCCTACGCGCGGTTCGTCGAGGGCAAGAAGGCCTGGACCAAAGTCATCGCCGGAACGCACGATTTCGCCGGGCAAGTCGCCGCGGTCGCCGTCGACGGTGACGACTTCCCCGTCAAGCACGCGCTCCTGCAATACATCGCCGCCTTCCCCATCGCGCTGAAGTGCCATGTGTTGTATGGTTCGGATGTTAGGAGGGATCTTCAGCATATGCTGGAAGTGGATGATCTGGCGGTGGTTATGAATTCGAAGCACCGGCCTCGCTGCATTATTGAGTTTATATCACAGAGCATTCGGTTGCTGAAATTGGAGGAGTCTAGAAGAAATGTCCTGGAATCAAAGATCTCTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGTATTCCTATTCCTTTGTCATATACTCGCTTGACCTCGAGGTTTCTTGTCCTGTGGCATCTGACACTCCCTATCATACTTTGGGATGATTGTCATTGGATTGTGGTTCCTGCTACATTTATTAGCGCTGCCTCTTTGTTTTGTATTGAAGAAGTCGGAGTTCTTATAGAGGAGCCATTTCCAATGCTGGCACTTGATGATCTCTGCCAAAAGGCACACAAAGACATCCAAGAAGCAATTGCAACCGGAAATTTAATTCATGCGCGCCTTGTTGCAAAGCAAAATAACCACTCCGAAGAGCATTCACCAAATGGCTGGCCTAACTCCTAG 1227 0.5681 MYHQPRSPTPTPAFSSLFTPKCPFNINRKLFLLVPSKPNKPPTRASLPRPSSGPAQALISLLRSVPDWADTVQERGMQKRRSLYTHLNWRDHRSSLRHLRHVLSSLSSRVILSLVPPVLFFTAFAAAIAAYNSAVILHLLPEFLPLLRASTLPYQLTAPALALLLVFRTEASYARFVEGKKAWTKVIAGTHDFAGQVAAVAVDGDDFPVKHALLQYIAAFPIALKCHVLYGSDVRRDLQHMLEVDDLAVVMNSKHRPRCIIEFISQSIRLLKLEESRRNVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDDLCQKAHKDIQEAIATGNLIHARLVAKQNNHSEEHSPNGWPNS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2779 408 Pfam Bestrophin, RFP-TM, chloride channel 92 367 IPR021134 GO:0005254
Ssu4g2779 408 PANTHER BESTROPHIN/UPF0187-RELATED 15 405 - -
Ssu4g2779 408 PIRSF UCP016988 13 408 IPR024701 GO:0005247|GO:0042548
Ssu4g2779 408 PANTHER UPF0187 PROTEIN YNEE 15 405 IPR044669 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2779 K08994 - gmx:100790216 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2779 4 70850321 70853545 Ssu4g2779 4 70850321 70853545 ECH