Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2777 ATGCAGAAAGGGGATGTTACTTTCCGGCAGAAAGATTTTAGACAAGCAATCGAGTGTTACTCGCAGTTCATTGATGCTGGAACAATGCTTTCTCCTACAGTCTATGCACGGCGCAGTTTGTGTTATCTCATTAGTGACATGCCTCAGGAAGCGCTGAACGATGCAATGCAGGCACAAGTCGTTTCCCCGGTATGGCACATAGCATCTTATCTTCAATCTGTTGCCCTCACAGGAATTGGGATGGAGAATGAAGCCCAAGCAGCACTTAAAGAGGGCACAACACTGGAATCCAAGCGGAATGCAAATACCAAGCCAAAATGA 321 0.4642 MQKGDVTFRQKDFRQAIECYSQFIDAGTMLSPTVYARRSLCYLISDMPQEALNDAMQAQVVSPVWHIASYLQSVALTGIGMENEAQAALKEGTTLESKRNANTKPK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2777 106 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 2 105 IPR045845 GO:0004672|GO:0009742
Ssu4g2777 106 PANTHER LRR RECEPTOR-LIKE KINASE 2 105 - -
Ssu4g2777 106 SUPERFAMILY TPR-like 2 96 IPR011990 GO:0005515
Ssu4g2777 106 Gene3D Tetratricopeptide repeat domain 1 105 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2777 Ssu-Chr4 70841443 70842262 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2777 K14500 - gmx:100799260 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2777 4 70841443 70842262 Ssu4g2777 4 70841443 70842262 ECH