Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2771 ATGAAGGTTTCTACCTCAATAGCATCCTTTGTTCTGTTGCTTCTCCTTTCAACAAATTGTTTGTGTTTTGAAGTACAACAGTGTCGTCCTAGTGGCAGAATCATAGGAAAGAAACCCCCTCCTAAAGAATGCAACCAAGAGAATGATTCTGATTGTTGTGTACAAGGCAAGAAATACACAATATACAAATGTTCTCCACCAGTGTCAAGCCACACAAAGGCCCAACTCACTCTCAATAGTTTTCAAAAGGGTGGAGATGGAGGTGGCCCTTCAGAATGTGACAATCAATACCATTCTGATGACACACCAGTAGTTGCACTTTCCACTGGATGGTTCAACAATAGGAGTAGGTGCCTCCGCAACATCACCGTCAGTGCAAATGGCAAAAGTGTGCTGGCCATGGTGGTGGACGAGTGTGACTCTACCATGGGATGTGATGAAGACCATGATTACCAACCCCCTTGTTCCAACAACATTGTTGATGCCTCCAAGGCTGTGTGGAAAGCCTTAGGTGTGCCTCAAAATCAGTGGGGCGGATTAGAAATTACATGGTCTGATGCTTAA 564 0.445 MKVSTSIASFVLLLLLSTNCLCFEVQQCRPSGRIIGKKPPPKECNQENDSDCCVQGKKYTIYKCSPPVSSHTKAQLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNNRSRCLRNITVSANGKSVLAMVVDECDSTMGCDEDHDYQPPCSNNIVDASKAVWKALGVPQNQWGGLEITWSDA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2771 187 PANTHER LIPID TRANSFER PROTEIN 5 187 - -
Ssu4g2771 187 SUPERFAMILY Barwin-like endoglucanases 68 185 IPR036908 -
Ssu4g2771 187 Gene3D - 71 186 IPR036908 -
Ssu4g2771 187 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 5 187 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2771 Ssu-Chr4 70738756 70739319 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2771 - - gmx:100785431 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2771 4 70738756 70739319 Ssu4g2771 4 70738756 70739319 ECH