Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2757 ATGGACAGGGACAACGAGACATATCTGAAACTCTTCGGCCGTTCTAATCACCAGAAACCGTGCTTGTTGTCGAAGAAGGGCAAAGCCACGGCACTTACCACCACGGTGATTGTGCTGTTTTGCTGTGTAGCCACTTTCTGTGCTTTTACTCTCTGGAATACGTCCACATTCGCAGGTGTTTCCATTCCAATCAAGAACCTCTCAACCAACCACATAGCCAAACCCCAAGAGCAAGAATTTCCCCTTAGATGCACCCAAGAGAAAAACGTGACACAAATGTGCCCAAGGGACTACCCCACTTCACACAACCCCACGAATCATAGCCGCACGTGTCCCTCGTACTTTAGATGGATCCACGAAGATCTAAGGGCGTGGAGAGAGCGAGGGATCACAAGGGAAATGTTGGAGGGGGCAAGAAGAACGGCGCACTTTAGGGTAGTGATCGTGGACGGGAGGGTGTACGTGGAGAAGTATGCGAAAGCAATTCAGACCAGAGACGTGTTCACTTTGTGGGGCATCTTGCAACTCATGAGAATGTACCCTGGGAGGGCCCGTTCTTCCAAGGAAAGGTTTGAGGGCCCAAATGctgcaccaccaccactgtttcGGTATTGTTCGGATCAGTGGAGCTTGGATATTGTGTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAGATAAATATAAAGCCATGGAAATATGTCCTAGAAGATATAAAAAATGGGAACAAGAAGACCAAGTGGAAGGACAGAGTGCCATACGCCTACTGGAAGGGTAACCCTTATGTTGCTTCAACTAGGAAAAACCTTATGCATTGCAATGTCACAGAAAAAAATGACTGGAACACTCGCCTATACGTacagGACTGGGGACAAGAATCGAATCAAGGGTACAAGAAATCCAACTTAGGGGACCAATGCACCCATAGgtataaaatatacatagaaGGATGGGCTTGGTCTGTAAGTGAAAAGTACATTTTGGCATGCGATTCTACGACTCTATATGTTAGGTCTGGGTTCCATGATTTTTTTGTCCGAGGCATGGTGCCATTAGAGCACTATTGGCCCATTAGAGACAATAGCAAGTGCACTTCTCTTAAGTTTGCAGTGGAATGGGGCAACAACCACACTGATAAGGCACAAGCAATAGGAGAGGCTGCTAGCAAATTCATTCATGAGGACATGGACATGGACTATGTATATGATTACATGTTTCATCTACTGAATGAATATGCAAAGCTCCTAAGGTTCAAACCAACCATACCTCGAGGAGCTGTGGAGTATTGTCCCGAAACAATGGCATGTGCTGTAAATGGTACACAGAGGAGGTTCATGGAGGAGTCAATGGTGAAGTTTCCTAGCGATTCAAATCCATGCACTATTCCTTCTCCATATGATCCTAAAAGCCTACAAGACTTTCTAGAGAAAAAAGCTAATTCAATAAGACAGGTGGAAATTTGGGAAGACGAATACTGGGGGAATAAAAATAAGGGACAATAG 1500 0.444 MDRDNETYLKLFGRSNHQKPCLLSKKGKATALTTTVIVLFCCVATFCAFTLWNTSTFAGVSIPIKNLSTNHIAKPQEQEFPLRCTQEKNVTQMCPRDYPTSHNPTNHSRTCPSYFRWIHEDLRAWRERGITREMLEGARRTAHFRVVIVDGRVYVEKYAKAIQTRDVFTLWGILQLMRMYPGRARSSKERFEGPNAAPPPLFRYCSDQWSLDIVFPDWSFWGWAEINIKPWKYVLEDIKNGNKKTKWKDRVPYAYWKGNPYVASTRKNLMHCNVTEKNDWNTRLYVQDWGQESNQGYKKSNLGDQCTHRYKIYIEGWAWSVSEKYILACDSTTLYVRSGFHDFFVRGMVPLEHYWPIRDNSKCTSLKFAVEWGNNHTDKAQAIGEAASKFIHEDMDMDYVYDYMFHLLNEYAKLLRFKPTIPRGAVEYCPETMACAVNGTQRRFMEESMVKFPSDSNPCTIPSPYDPKSLQDFLEKKANSIRQVEIWEDEYWGNKNKGQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2757 499 PANTHER GLYCOSYLTRANSFERASE 26 495 - -
Ssu4g2757 499 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 26 495 - -
Ssu4g2757 499 Pfam Glycosyl transferase family 90 107 488 IPR006598 -
Ssu4g2757 499 SMART cap10 174 418 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2757 Ssu-Chr4 70509291 70514435 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2757 - - gmx:100790123 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2757 4 70509291 70514435 Ssu4g2757 4 70509291 70514435 ECH