Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g2733 | ATGGCAGAGAAAGCAGAAAGCGTGTGTGCCTCGCCATCGCTGAAAATCTCGAAGGAAGTGGACCCCAGACATGCTTCGCAGACCTTGCGCTTCGTTGACGTCATGGGGGCTGCCATCCCCGTTCCTCGTAACTGCCACGAGCGTGGCTTCTACGACGGCTTCCTTCGGAGCTTCATCAAGGTCGATCACATCCAACGTGGACGAATCTCCTGTACTGTTGTCGCCAAACCACCCATCTGCAATGGCTATGGAACTCTGCATGGGGGGGCTGTTGCGTCCTTGGTTGAGATTCTGTCTACCTCTTGTGCTAGAACTGTAGTTGCTGAGGACAAGGAACTTTTTCTTGGGGAAATGAGCATTTCTTACCTCTCTGCTACTCCAGCAAATGAAGAAGTGCTGGCTAATGCCTCTGTGGTGAAGACCGGAAGAAATTTGACTGTTGTTGCAGTTGAGTTTAAACTGAAGAAAACTGAGAATTTGCTCTATAGTACTCATGCTACCTTCTATAACATGCCAGTTGCCAGTTTATGA | 531 | 0.4934 | MAEKAESVCASPSLKISKEVDPRHASQTLRFVDVMGAAIPVPRNCHERGFYDGFLRSFIKVDHIQRGRISCTVVAKPPICNGYGTLHGGAVASLVEILSTSCARTVVAEDKELFLGEMSISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKTENLLYSTHATFYNMPVASL | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2733 | 176 | PANTHER | THIOESTERASE SUPERFAMILY MEMBER-RELATED | 9 | 176 | IPR039298 | GO:0047617 | |
| Ssu4g2733 | 176 | TIGRFAM | unchar_dom_1: uncharacterized domain 1 | 59 | 152 | IPR003736 | - | |
| Ssu4g2733 | 176 | CDD | PaaI_thioesterase | 59 | 169 | - | - | |
| Ssu4g2733 | 176 | Pfam | Thioesterase superfamily | 83 | 157 | IPR006683 | - | |
| Ssu4g2733 | 176 | Gene3D | Hotdog Thioesterase | 41 | 172 | - | - | |
| Ssu4g2733 | 176 | PANTHER | OS07G0462700 PROTEIN | 9 | 176 | - | - | |
| Ssu4g2733 | 176 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 59 | 169 | IPR029069 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu4g2733 | Ssu-Chr4 | 69980150 | 69982940 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g2733 | K17362 | - | gmx:100499764 | 307.76 |
Event-related genes