Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2713 ATGTCTCTTTCGATGTCCAAAAGTCTGATGAATCTTCAAAGCCTTTTCGTAAGTGAATGTGGGATGATGGAGAGCATATTTAACCAAACGGAAGAGAGTATGATCGAAACTGAGGAAAGCATCTTTCCAAAGTTGAAGAATATCAACTTGAGAAGTAtgaagagattgagagagatcTGGACCAAATTTCCTCCACATTCCTTTGGCAAATTGGATGCATTGATCATTGATGGCTGTAAtaaacttgaaaatattttccctTCTTATATGGTCGGCAGATTTCGGAGTCTATGCAACTTGAAGGTTACTAATTGCAAATCAATGAAAGAGATATTTGACCTCAATGGTTGTAAACGTGATGCTGAGGATACGAGGTTGCAAAATGTTCATGTAGAAGCACTGCCAAAATTGGAGCATGTATGGAACAAAGACCCAGAAGGAATTCTTAACTTCAAAAATTTGGAAAAGATATGGGTTCGAGAATGTCTCAACTTAAAGCATATATTTCCAGTTTCTATAGCCACGTGtcttaaaaaacttaaatacctTGAAGTATGGAATTGTGGTCAGGTGAAGGAAATTGTTTTTAGGGGGGAAACAATCAACAAGAATAGCGTTTTGTTTGAGTTTCCTAAACTAACCACCGCCAGATTTTTAAGACTACCAAACCTTGAGAGTTTCTATCGGGGAACACATGAATTATGTTGTTCAACTCTGAATAACATATCTGTGGAACATTGTCACAAGCTCAAGCTTTTCAGAACAGAAATTGCAAATTCAGAAATAAAGCCAGTCTTCTTGCCTGAAAAGGTAATCTACAACTTGAAATCCATGCAAATAGAGCCACGCGATTCAATTTCTTTGAAGAGATATATGGGCAACTACCGAATGCACAACTGTCTCATGACACCGTCTACTGCAAAAAGCTTGGTTCAACTCACCACCATCAAGGTAATTCAATGTGAATCGATGAAGACCATTGTGTCAGAGCAAGAAATAGAACTCGATGCTCTGCATGAACTCGAAAGTTTCTGTAGCTCCCATCGTTGTGCCATTGAGTTTCCGTCCTTGGAAAAAGTTGTTGTGAGTGCATGTGGCAAGATGGAAAGGTTCACATTCTCTGAACTAGTCAACAAGACACCAAATTTGCGACAACTTTGTGTTAGGCATGGAAAGGAggaaaaaagattatattgggAAGGTGATTTAAATGCTACAATACGACACGTGTACAAGATTCGGGTACGTATCTATTATCGATAA 1263 0.3642 MSLSMSKSLMNLQSLFVSECGMMESIFNQTEESMIETEESIFPKLKNINLRSMKRLREIWTKFPPHSFGKLDALIIDGCNKLENIFPSYMVGRFRSLCNLKVTNCKSMKEIFDLNGCKRDAEDTRLQNVHVEALPKLEHVWNKDPEGILNFKNLEKIWVRECLNLKHIFPVSIATCLKKLKYLEVWNCGQVKEIVFRGETINKNSVLFEFPKLTTARFLRLPNLESFYRGTHELCCSTLNNISVEHCHKLKLFRTEIANSEIKPVFLPEKVIYNLKSMQIEPRDSISLKRYMGNYRMHNCLMTPSTAKSLVQLTTIKVIQCESMKTIVSEQEIELDALHELESFCSSHRCAIEFPSLEKVVVSACGKMERFTFSELVNKTPNLRQLCVRHGKEEKRLYWEGDLNATIRHVYKIRVRIYYR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2713 420 Gene3D Ribonuclease Inhibitor 2 194 IPR032675 -
Ssu4g2713 420 PANTHER - 301 406 - -
Ssu4g2713 420 PANTHER - 39 123 - -
Ssu4g2713 420 PANTHER RPP4C3 39 123 - -
Ssu4g2713 420 SUPERFAMILY RNI-like 7 389 - -
Ssu4g2713 420 PANTHER RPP4C3 151 255 - -
Ssu4g2713 420 PANTHER RPP4C3 301 406 - -
Ssu4g2713 420 PANTHER - 151 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2713 Ssu-Chr4 69200874 69208758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2713 - - ccaj:109802441 587.8