Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2700 ATGTCAAACGCAGAGCAAGCTCGTACTTTATTTGGAATTTCTCTCTCACACAGGCCCAAATGGCAACAGTTTCTCATTTGCTCTTCTGGCTTCTTCTTTGGATATCTCGTTAATGGCCTCTGCGAGGGTGCTTTTTTTCATAATGAAATGGCTGACTTGGTTTATTATTTCAGTTATGGCTGGTACTTTACATTTGTTCAAGGATTTGTTTACTTGTTTCTGATTTATCTCCAAGGCTTCACAAGCATGCAAATGGTGAACCCTTGGAAAACTTATGTGAAGCTTTCTGCTGTACTTATGGGTTCCCATGGCCTAACAAAGGGATCTTTGGCTTTTCTCAACTACCCAGCACAGATCATGTTCAAATCCACAAAGGTTCTTCCAGTGATGGTAATGGGTGCCTTCATAGCAGGTCTAAGAAGGAAATATCCATTTCATGAATATGTATCTGCTATACTTCTGGTGATTGGCTTGATCCTATTCACACTAGCAGATGCACAAACATCACCCAATTTCAGTGTCATTGGTGTTATTATGATATCCGGGGCTTTGATCCTGGACTCCTTTTTGGGAAATCTGCAAGAAGCAATCTTCACAATTAACCCTCAGACCACACAGATGGAGATGCTTTTCTGCTCTACTGTGGTGGGTTTGCCTTTCTTAATCCCTCCCATGCTTTTTACAGGAGAGTTATTCAAAGCATGGACTTCATGTTCACAGCATCTCTACGTGTATGGAGTGTTAGTGTTTGAAGCAATGGCCACATTTGTTGGCCAAGTCTCTGTGCTGTCACTCATTGCCATTTTTGGAGCTGCCACTACAGCCATGATAACAACTGCAAGAAAGGCAGTGACACTGCTACTATCATAcctcatatttacaaaaccactgaCAGAACAGCATGGGGCTGGACTTCTACTCATAGCAATGGGGATTACATTGAAGATATTTCTTGATGACAAATCCAACAAGAAGGCCTTAAACTCTTCTCCCATTGCCAATATTCCGAAGCCTTCTAATGACAAAGAACTGAGGGCGCAAGCAGATTATTATGAAGGAGAAGATGAAGAAAGGAGACCGTTGGTCTAG 1089 0.4114 MSNAEQARTLFGISLSHRPKWQQFLICSSGFFFGYLVNGLCEGAFFHNEMADLVYYFSYGWYFTFVQGFVYLFLIYLQGFTSMQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMVMGAFIAGLRRKYPFHEYVSAILLVIGLILFTLADAQTSPNFSVIGVIMISGALILDSFLGNLQEAIFTINPQTTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHLYVYGVLVFEAMATFVGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGAGLLLIAMGITLKIFLDDKSNKKALNSSPIANIPKPSNDKELRAQADYYEGEDEERRPLV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2700 362 MobiDBLite consensus disorder prediction 342 362 - -
Ssu4g2700 362 MobiDBLite consensus disorder prediction 329 362 - -
Ssu4g2700 362 Pfam UAA transporter family 23 316 IPR013657 GO:0055085
Ssu4g2700 362 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 2-LIKE 1 333 - -
Ssu4g2700 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 316 - -
Ssu4g2700 362 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 1 333 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2700 Ssu-Chr4 68552317 68555058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2700 109 331 Organic Solute Cotransporters AT5G59740 26.609 1.01e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2700 K15277 - gmx:100791781 583.948