Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2699 ATGGCTTCAAACCCCAGAAAGGGACTAGTCTTACGTTCAAAGGCCATAGCTGATGCAGCTTCATGGTACTGTGCCTTTGTTCTTGTGGCCCTCGTGCTGCTAAGCATGTTCAAAGACAGCTCTATGCTTCCAAATCGCTCCAACAATTTCGTAGACAGCCAACTCTTGTCCCGGCCGTGCGACGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCACACAATCAGCGACAAGTGTGGTGACCCTTTTATAGTTGAGAATAACCCTCATATCCATGACCCTGATGATGTCTTCCATGGCCTCGTTATCAAGATTACACCCTCACATCAGACCTAG 336 0.4732 MASNPRKGLVLRSKAIADAASWYCAFVLVALVLLSMFKDSSMLPNRSNNFVDSQLLSRPCDEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFHGLVIKITPSHQT 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2699 111 PANTHER EMBRYO SAC 1 4 110 - -
Ssu4g2699 111 Gene3D LysM domain 54 111 IPR036779 -
Ssu4g2699 111 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 4 110 - -
Ssu4g2699 111 CDD LysM 63 105 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2699 Ssu-Chr4 68514024 68514359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2699 - - gmx:100815990 176.407