Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2698 ATGGGAGATCAAGCCGAGGGAACGGTTCAGAACGTTCTGGAACAAGAGACTCTGAAGTGGATCTTCGTCGGCGGCAAAGGCGGCGTTGGCAAAACGACATGCAGTTCAATTCTCTCCATTCTCCTCGCCACCGTTCGCTCCTCCGTTCTCATCATCTCCACCGACCCCGCCCACAATCTCAGCGACGCGTTTCAACAGCGCTTCACCAAAACCCCCACTCTCGTCAACGGCTTCTCCAACCTCTATGCCATGGAGGTGGATCCTACCGTTGAACATGAGGATATGGGTGGCTCTGATGGGATGGACGGTTTAGTCTCCGAGCTCGCGGGCGCGATTCCCGGAATTGATGAGGCCATGAGCTTTGCCGAGATGTTGAAATTGGTGCAGACAATGGATTATTCTGTTATTGTATTTGATACTGCTCCCACTGGCCATACACTCAGACTATTGCAATTCCCATCAGTTTTAGAAAAGGGTCTTGCAAAAATGAtgtctttgaaaaataaatttggtgGTTTGTTTAATCAGATGACTCGCATGTTTGGCATGGGTGAGGATTTTGGAGATGATGCAATTCTTGGGAGGCTTGAAGGCATGAAGGATGTAATTGAACAAGTTAATAAGCAATTCAAAGATCCGGACATGACAACCTTTGTCTGTGTATGCATTCCCGAATTCCTTTCTCTATATGAAACAGAAAGGTTGGTTCAGGAACTTACAAAGTTTGAAATTGACACACACAATATCATCATCAATCAAGTAATCTTTGATGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAATATCTGGACCAGTTTTACATGTTGTATGATGACTTTAACATTACCAAGCTGCCATTGCTCCCAGAAGAGGTTACTGGGGTTGAAGCTCTGAAAGCATTTTCAAGACATTTTACATCACCATATCAACCCTTATCTAGTAGAGTAGACCAAGTAGAACGGTTAGAGCGTAAAGTATCAGCACTACAACGCCAGTTACATGATGCTGAAGAAGAATTGGAGGGACACAAAAGGGGATGA 1062 0.436 MGDQAEGTVQNVLEQETLKWIFVGGKGGVGKTTCSSILSILLATVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPTVEHEDMGGSDGMDGLVSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKNKFGGLFNQMTRMFGMGEDFGDDAILGRLEGMKDVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVEALKAFSRHFTSPYQPLSSRVDQVERLERKVSALQRQLHDAEEELEGHKRG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2698 353 Hamap ATPase <gene_name> [GET3]. 5 320 IPR027542 GO:0005524|GO:0016887
Ssu4g2698 353 Coils Coil 319 353 - -
Ssu4g2698 353 Pfam Anion-transporting ATPase 19 311 IPR025723 -
Ssu4g2698 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 308 IPR027417 -
Ssu4g2698 353 Gene3D - 1 328 IPR027417 -
Ssu4g2698 353 PANTHER ATPASE LOC107826790 3 353 - -
Ssu4g2698 353 CDD ArsA 34 309 - -
Ssu4g2698 353 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 3 353 IPR016300 GO:0005524|GO:0016887
Ssu4g2698 353 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 22 310 IPR016300 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2698 Ssu-Chr4 68501907 68508673 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2698 K01551 - gmx:100788968 658.677