Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g2697 | ATGCAGCTGACACTTGAATTCGGAGGGGGATTGGAACTTCTTTGTGACTCTAAGAAGATTCATAATGTCAATATCGAGCAACAAAATGGACAAGACAAGTTAACCATGAAAGATTTGCTTCCTTGGGTACGGACCAACTTGATTAAGGAGAGGCCTGAAATGTTCATGAAAGGAGATACTGTGAGACCTGGAGTTCTTGTCCTTGTGAATGATTGTGATTGGGAGCTAAGTGGTCAGCTGAATACATCACTGGAAGACAAAGATGTGGTGGTTTTTATATCAACCCTGCATGGTGGTTAG | 300 | 0.42 | MQLTLEFGGGLELLCDSKKIHNVNIEQQNGQDKLTMKDLLPWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLNTSLEDKDVVVFISTLHGG | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2697 | 99 | Hamap | Ubiquitin-related modifier 1 [URM1]. | 1 | 99 | IPR015221 | GO:0005737|GO:0034227 | |
| Ssu4g2697 | 99 | SUPERFAMILY | MoaD/ThiS | 1 | 99 | IPR016155 | - | |
| Ssu4g2697 | 99 | Pfam | Urm1 (Ubiquitin related modifier) | 3 | 99 | IPR015221 | GO:0005737|GO:0034227 | |
| Ssu4g2697 | 99 | CDD | Ubl_Urm1 | 3 | 99 | IPR015221 | GO:0005737|GO:0034227 | |
| Ssu4g2697 | 99 | PIRSF | Urm1 | 1 | 99 | IPR015221 | GO:0005737|GO:0034227 | |
| Ssu4g2697 | 99 | Gene3D | - | 1 | 99 | IPR012675 | - | |
| Ssu4g2697 | 99 | PANTHER | RURM1 PROTEIN | 1 | 99 | IPR015221 | GO:0005737|GO:0034227 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g2697 | K12161 | - | gmx:100306072 | 189.504 |