Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2689 ATGAGTCTCACCTTATGGCTTTTCTTGCTACCCTTCTGCCTCCTAAACAtgaacatcaacatcattttgGGAACTGGTCATTGTCTTGGCCATCAACAATCTTTGTTGCTCCAGTTGAGGAACAACCTCATATTCAATCCGACCACGTCCCAAAAACTGATTTACTGGAACCAAAGTGATGATTGTTGTGAATGGAATGGAGTGGCATGCAACAAAGGTCATGTTATAGCCCTTGACTTGAGCCAAGAATCCATCTCTGGGGATATTAAAAACGTAAGCAGTCTCTTCAAGTTGCAATATTTGCATAGTTTGAATTTGGCCTATAATGAATTCCATTCTGGGATTCCTCCAGGGTTTCAAAAGCTAAAGAATTTGAGGCATTTGAATTTGTCAAATGCTGGCTTTGAAGGGCAAATTCCAATTGAGATCTCTTACCTGACAAAGTTGGTAACTCTTGATTTGTCTAGCACAGTTACTTCACAACATGCTTTAAAACTTGAGATGCCAAATATTGCAATGCTTGTGCAGAACTTCACAGAAATTAAAGAGTTACATCTGGACGGCGTAGCAATATCAGCCAAAGGAAAATCTCAGCAGTGA 600 0.3883 MSLTLWLFLLPFCLLNMNINIILGTGHCLGHQQSLLLQLRNNLIFNPTTSQKLIYWNQSDDCCEWNGVACNKGHVIALDLSQESISGDIKNVSSLFKLQYLHSLNLAYNEFHSGIPPGFQKLKNLRHLNLSNAGFEGQIPIEISYLTKLVTLDLSSTVTSQHALKLEMPNIAMLVQNFTEIKELHLDGVAISAKGKSQQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2689 199 SUPERFAMILY L domain-like 28 188 - -
Ssu4g2689 199 PANTHER LEUCINE-RICH REPEAT-CONTAINING, PLANT-TYPE, LEUCINE-RICH REPEAT DOMAIN, L-RELATED 1 197 - -
Ssu4g2689 199 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Ssu4g2689 199 Gene3D Ribonuclease Inhibitor 27 198 IPR032675 -
Ssu4g2689 199 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2689 Ssu-Chr4 68358644 68361198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2689 6 194 Receptor kinase-like Gene Family AT1G47890 39.594 4.78e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2689 - - gmx:100805833 332.028