Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g2676 | atgagcGAGGGAGGAAAGCGACAAGGTGGGAGAGCGTTACCTCCGCCTCCAAGAGGCCCTCCTCCTCCTCCCCCCTCTCGCCCTCGCCTCGAACCCGTCGATCGCGAAAAGACATGTCCCTTGCTTCTCCGAGTGTTCACTAAGATTGGGGGTCACCATACGATGGAAGACTTTGCCGTCAGGGGCAAGGAGCCCAAGGACGAGGTCCAGATTTACACCTGGAAGGACGCTACTCTTCGAGAGCTAACCGATCTTGTAACAATCCCACTCCATTCAAAACTATTACTCcattttctctccattttttttttttccctttatgtTTTTCGGTTGACGGCGTGTTTCGTGCAGGTCAAAGAAGTGGCTCCCGCTGCAAGAAGAAGAAACGCCAAGCTCTCCTTCGCCTTTGTGTTTCCTGATAAAAACGGCCGTTTCAAAGTTCAAGAGGTGGGTAAGACATTATCTTATGGAAATGGAAGATTAGATGACGGCAAGGCTTTAGCTGAACTTGGTTTTGagATCGGTGACTACTTGGATGTAGCTATTTTGTAG | 552 | 0.4692 | MSEGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVTIPLHSKLLLHFLSIFFFSLYVFRLTACFVQVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALAELGFEIGDYLDVAIL | 183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2676 | 183 | PANTHER | DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED | 7 | 86 | - | - | |
| Ssu4g2676 | 183 | PANTHER | SAP18 | 117 | 183 | IPR010516 | - | |
| Ssu4g2676 | 183 | PANTHER | SAP18 | 7 | 86 | IPR010516 | - | |
| Ssu4g2676 | 183 | MobiDBLite | consensus disorder prediction | 13 | 28 | - | - | |
| Ssu4g2676 | 183 | Gene3D | ASAP complex, SAP18 subunit | 25 | 183 | IPR042534 | - | |
| Ssu4g2676 | 183 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Ssu4g2676 | 183 | PANTHER | DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED | 117 | 183 | - | - | |
| Ssu4g2676 | 183 | Pfam | Sin3 associated polypeptide p18 (SAP18) | 32 | 87 | IPR010516 | - | |
| Ssu4g2676 | 183 | Pfam | Sin3 associated polypeptide p18 (SAP18) | 115 | 182 | IPR010516 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g2676 | K14324 | - | gmx:100526922 | 258.455 |