Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2667 ATGGGAATAGCAGATACATACCATAACATGGAGCTTCAACCACTCCTTGTGTTGGGCCTTCCATCAATCTTCCCATCATTCGAAACACTAAACTCTCACAAGTACATTTTCCTCAAAGCATTCTCTTCTAAGCTCCCTCTCCTTCAATTCCTCGCTACCAAAAACGTTGCCCCTTCCTCCATTCGTGCCATTCTTTGCGACCCCCGCCAGGCAGTCACTGCCGACATCCTCGGCGTCCTTCCGTCGATGGGGTTCATCCTCACCACCACCGCCGGAATGGACCACATTGACCTTCCTGAATGCCGCAGACGCGGCATTCAGGTTGTCAGCATCGGCAGCCTCGCTGCCGATGATGTGGCCGACATGGCCATAGGATTGTTCATTGATGTGCTTTACAAAATTTCCGCTAATAATCGCCGCGTTAGGAAATGTGTTGCTTCTAAATCGTTGAACTTCACTATCGCTCCTAAGCTAGGAGGCAAGAGAGTTGGGATCGTTGGATTGGGAAGTATTGGAGGGGAAGTTGGTAAAAGGCTAGAGGCCTTTGATTGCAAAGTTATGTACCATTCAAGGAACGAGAAGCCATTTGTGCCATACCCTTATTATTCCAACGTAGTTGAGCTTGCCGCTAATTGTGACGCCCTTGTGGTATGTTGTCCACTAACTAAGCAAACACGACACATAATCAATAGGGAAGTGATGTTGGCACTGGGGAAAGATGGGGTTATTGTGAACGTTGGACGAGGACCCGTGATTGATGAAAAGGAATTGGTGCGGTGTTTGATGGAGGGGGAGATAGGAGGTGCGGGTTTGGACGTGTTTGAGAATGAGCCAAGCGTTCCCAAAGAGCTTTTTGAATTGGATAATGTTGTGTTATCCCCACATGCGGGTGCACACACTGAAGAGTCATGCCAAGTAAAATGTGAACTCGTGGCAGCGAGTCTAGAGGCCTTTTTTGTAAGCAAACCAAGAATTGTTCCAGCCATAATTGATGAGAGGCATTTTTATCCAAGTTTTGAGTGTCTTCCTGTTTCTTCTGGCGAACCGGCTTATGCTTAA 1059 0.4759 MGIADTYHNMELQPLLVLGLPSIFPSFETLNSHKYIFLKAFSSKLPLLQFLATKNVAPSSIRAILCDPRQAVTADILGVLPSMGFILTTTAGMDHIDLPECRRRGIQVVSIGSLAADDVADMAIGLFIDVLYKISANNRRVRKCVASKSLNFTIAPKLGGKRVGIVGLGSIGGEVGKRLEAFDCKVMYHSRNEKPFVPYPYYSNVVELAANCDALVVCCPLTKQTRHIINREVMLALGKDGVIVNVGRGPVIDEKELVRCLMEGEIGGAGLDVFENEPSVPKELFELDNVVLSPHAGAHTEESCQVKCELVAASLEAFFVSKPRIVPAIIDERHFYPSFECLPVSSGEPAYA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2667 352 Gene3D - 116 300 - -
Ssu4g2667 352 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 61 322 IPR006139 GO:0016616|GO:0051287
Ssu4g2667 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 298 IPR036291 -
Ssu4g2667 352 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 163 190 IPR029752 -
Ssu4g2667 352 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 11 327 - -
Ssu4g2667 352 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 60 142 - -
Ssu4g2667 352 Gene3D - 59 323 - -
Ssu4g2667 352 CDD HPPR 13 319 - -
Ssu4g2667 352 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 297 IPR006140 GO:0051287
Ssu4g2667 352 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 11 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2667 Ssu-Chr4 67877619 67879563 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2667 - K15919 lang:109340199 421.779