Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2665 ATGGCGGTGGCCTTGTTGATTGACGTGGTGATGAAGATTTCCGCGGCGGATCGGTGTTTGAGAAAACGGGTTCCGCTTGCTTCACTGGATTTTCCACTTGCTTCCAAGTTGACAGGAAAGAAAGTAGGAATTGTTGGTTTGGGAAAAATTGGCTTAGAAGTGGCACATAGGCTTGAGGCCTTCGATTGCATTATAGCATACAACTCTAGGAGCAAAAACCCCTTTGTTTCGTACCCTTTCTATTCTAGTGTTGTTGAGCTTGCCACTAACAGCAACGTACTTGTTCTCTGTTGTGCTCTAAATGACCAAACAAGACACGTGATCAACAGAGAAGTCATGTTGGCACTGGGAAAAGTAGGAGTTATTGTGAATGTGGCAAGAGGGGCTGTGATAGATGAAAAGGAATTGTTGCGGTGTTTGATTGAAGGGGAAATTGGAGGTGCTGGTTTGGATGTGTATGAGAATGAACCTCTGGTTTGTGAAGAGTTCTTTTCATTGGATAATGTAGTCCTATCACCACATGCAGGTTACTCCACGTCAGAGTCTTACGTTGGTATTTGCCAACTTGTGGGACGCAATTTGGAagcttttttctcaaataagcCTCTTATTACTCCAGTCACATAG 627 0.4274 MAVALLIDVVMKISAADRCLRKRVPLASLDFPLASKLTGKKVGIVGLGKIGLEVAHRLEAFDCIIAYNSRSKNPFVSYPFYSSVVELATNSNVLVLCCALNDQTRHVINREVMLALGKVGVIVNVARGAVIDEKELLRCLIEGEIGGAGLDVYENEPLVCEEFFSLDNVVLSPHAGYSTSESYVGICQLVGRNLEAFFSNKPLITPVT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2665 208 Gene3D - 1 179 - -
Ssu4g2665 208 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 1 207 - -
Ssu4g2665 208 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3 176 IPR006140 GO:0051287
Ssu4g2665 208 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 177 IPR036291 -
Ssu4g2665 208 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2665 Ssu-Chr4 67840664 67846590 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2665 - K15919 gmx:100777313 338.576