Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2605 ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACCGCTCTGCGAGGATTGGGCTCGATCATGATTTTGTTGGTTCTTGGGGTCGTTGGTGTCACTTACTATGCCGTTGTTTTGACCAATTATGGCCCTGCTTTGTATGCCGGAGGACTTGATTCTCTTGTTGCCTTGGCAGTGTTGATCTTGTTTCATGGCTTGTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGGAGTGTCCCTCCAAACTGGAGGCCTACAATTGATGAGGAAAGAGGGGAGGCTGATCCGTTAGTTGGGATGGAGTTTAGTAACGTGCAGCCTGATCCCAATCAACGGATTCGGTACTGTCGGAAGTGCAATCAGCTCAAGCCTCCTCGATGCCATCATTGTTCAGTTTGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTGTGTTGGGGCtctaaattacaagtatttccttcttttcttgTTCTACACTTTTCTTGAGACGACTCTAGTGACTGCATCCTTGCTGCCACATTTCATAGCATTCTTTAGTGATGGAGAAATCCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGTTTTAAACCTGGCCTTTGCACTGAGCGTCTTAGGATTTCTCATCATGCACATATCTTTGGTGGCTGCTAATACGACCACTATTGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGTTATGACCTTGGTCGTCGAAAGAATTTTGAGCAGGTTTTTGGGATGGACAAGAAGTACTGGTTCATCCCAGCTTATTCAGATGAAGATATACGAAGGATGCCAGCTCTTCAAGGTCTTGACTATCCATCAAAACCTGACTTCGATTCCCAATAG 915 0.4459 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYAGGLDSLVALAVLILFHGLLVMLLWSYFSVVFTDPGSVPPNWRPTIDEERGEADPLVGMEFSNVQPDPNQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSDEDIRRMPALQGLDYPSKPDFDSQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2605 304 Pfam DHHC palmitoyltransferase 121 247 IPR001594 GO:0016409
Ssu4g2605 304 ProSiteProfiles DHHC domain profile. 124 174 - -
Ssu4g2605 304 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14 297 - -
Ssu4g2605 304 PANTHER S-ACYLTRANSFERASE 14 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2605 Ssu-Chr4 66160400 66165279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2605 8 304 Lipid Metabolism Gene Families AT4G22750 66.890 1.27e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2605 K20028 - gmx:100819811 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2605 4 66160400 66165279 Ssu4g2605 4 66160400 66165279 ECH