Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2603 ATGTCTAATTGGTCCCCTGAAAATGCCAAGAGAGCTTATCTCCAAGCACTCAAAATGGCCAAGAGAGGTAAAGAACCTGATGTAGCCGAGTTCATATCTGCTCTAGCAGCAGGCAATAATGCACAACTCATGGTGGTGGCTGGTGCCGGTGTGGCCGGTTCGGTAACGCTTGCTCTGGCTGCAGCTGCTCATCAAACTGGTGGCCGTGTGGTATGCATTTGTTGTGGGCAAATTGAGTCACATGCATCAAGAAAAGCTCTAGGGGTTTATGGAGATTGTGTTGAGTTTGTTGTAGGAGATGTGAAAAGCCTTCTGCTAGGGGATTACAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATCACTAATGCAAGGGAAATTTTTCTGGCAGCATTTAAAGGGGCCAACAATGATGAGGCACTTGTGGTTGGTTACAATGTCAAGCACAGGGCCTCACGGTGGAGACAACTGAGGGCATCATTTTTACCTATTGGAGAAGGGTTGCTGGTGGCCAAAATAGATCCCAATGTGAAGGGTAACGACAAGGTTGTCCAAAGGAGGAGTCGTTGGATTGTTCAAGTAGATAACTGCACCGGAGAGGAACATATTTTTAGGGTCACCTCTCCTCATAGGAAGGTGCAGACTGAAGTTTAA 654 0.4679 MSNWSPENAKRAYLQALKMAKRGKEPDVAEFISALAAGNNAQLMVVAGAGVAGSVTLALAAAAHQTGGRVVCICCGQIESHASRKALGVYGDCVEFVVGDVKSLLLGDYKGADFVLVDCDITNAREIFLAAFKGANNDEALVVGYNVKHRASRWRQLRASFLPIGEGLLVAKIDPNVKGNDKVVQRRSRWIVQVDNCTGEEHIFRVTSPHRKVQTEV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2603 217 PANTHER DUF1442 FAMILY PROTEIN 1 211 IPR009902 -
Ssu4g2603 217 PANTHER DUF1442 FAMILY PROTEIN 1 211 - -
Ssu4g2603 217 Gene3D Vaccinia Virus protein VP39 5 176 IPR029063 -
Ssu4g2603 217 Pfam Protein of unknown function (DUF1442) 4 205 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2603 Ssu-Chr4 66114343 66115297 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2603 - - pvu:PHAVU_010G083400g 360.533