Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2601 ATGATGCCAGAAATTAAAGGCACGGGTGCAAGACACGTGTGCATTGTCCCTGATGAACGGTCGAGGATGCAGTACATAAAGGCCCTGGCAGAGATGGGGGTGTCGTCCCCGCCGGAGGTGGTGACCGGGGACGCGGAGATGGCGGTGGCGCGGCTCGTGGGGTTGGACTTTCTGGTGGTGGATTGCAAGCGGATGGAGGTCGCTAGGGTTCTGAGGGTGGCCAAGGTGAGTCCAAGAGAGGCGGTTTTTGCATGCAAAAATGCATGGGAGAGAAACTTTTGTGGCGGGTTCAGATGGAGCGTGGTCGTCCATAGGTCGGTGTTCCTGCCTGTTGGGAATGGTTTGGATATTGCCTACAAAGGGAGCAGGAGTGTTGCAGCAGCACCAACTGCTTCAAAGGGTCCTAGCCGATGGATCAAGCACATAGATCAAGAATCTAGAGAAGAGCACCTTTTCTGA 459 0.5512 MMPEIKGTGARHVCIVPDERSRMQYIKALAEMGVSSPPEVVTGDAEMAVARLVGLDFLVVDCKRMEVARVLRVAKVSPREAVFACKNAWERNFCGGFRWSVVVHRSVFLPVGNGLDIAYKGSRSVAAAPTASKGPSRWIKHIDQESREEHLF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2601 152 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 7 152 - -
Ssu4g2601 152 PANTHER DUF1442 FAMILY PROTEIN 7 152 IPR009902 -
Ssu4g2601 152 Pfam Protein of unknown function (DUF1442) 7 152 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2601 Ssu-Chr4 66084655 66086727 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2601 - - gmx:100791746 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2601 4 66084655 66086727 Ssu4g2601 4 66084655 66086727 ECH