Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2591 ATGTCCCAACTGAAGCAAATGTCGCACACAGACAGTGCCCCTTCGACCCCAGGGAAGTTCAAGATGGACAAAGCCTCGTACTTCAACCGCGTGCGGTGGCACACCTCGCTGGCGAAGCTCGCCGTGTGGTCCTTCGTCTTCCTTGCCGCGATCTTGATCTTCTTTTTCCGGTCGCCGGCGTCGTCGCCGGTGCCGGCGGACCTCTCCCGGCGGTCCCTGAGGACCTACAACTGGGGCGGACCCGTCTGGGAGAAACGGGTCCGGGCCTCGGCCCGGGTCCGGTCCCGCAACGGGTTTGCCGTGTTGGTCACCGGGGCCGCTGGCTTCGTCGGCACCCATGTTTCCGCGGCGCTGAAGCGCCGCGGAGACGGGGTGCTGGGAATTGACAATTTCAATGACTATTATGACCCTTCACTTAAGCGTGCACGCCAGGCGCTCCTGGAGCGCACTGGTGTGTACATAGTGGAGGGTGATATCAATGATGAAGCACTCTTGAGGAAGCTTTTTGAGGTTGTGCCTTTCACTCATGTGATGCACTTGGCTGCTCAGGCTGGTGTGAGGTATGCCATGGAGAATCCTGGCTCTTATGTGCATAGCAACATTGCTGGTTTTGTGAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCCCAACCTGCTGTTGTGTGGGCCTCTAGTAGCTCAGTTTATGGACTCAACACCAAGGTTCCGTTTTCTGAGAGGGATAGGACTGATCAGCCTGCTAGTTTGTATGCTGCCACTAAGAAGGCTGGTGAGGAAATTGCTCACACTTATAACCATATATATGGTCTTTCATTGACTGGCTTGAGGTTCTTCACTGTTTATGGCCCTTGGGGTAGGCCCGACATGGCTTACTTCTTCTTCACTAGGGATATTTTGAAGGGGAAGGTGATCCCCATATTTGAGGCCGCGAATCACGGCACGGTTGCGAGGGATTTTACTTACATTGATGATATTGTGAGGGGATGTTTGGGGGCTTTGGATACCGCGGAGAAGAGCACGGGGAGTGGGGGGAAGAAGAGGGGGGCGGCACAGTTGAGGGTGTTCAATTTGGGGAATACTTCGCCGGTGCCGGTTAGTGACCTTGTGAGCATTTTGGAGAGGCTGTTGAAGGTTAAGGCGAAGAGGAACATAATGAAGTTGCCGCGGAATGGGGATGTGCAGTTTACTCATGCCAACATTAGCTATGCGCAGAGGGAGCTCGGGTATAAGCCGACCACGGATCTGCAGAGTGGTTTGAAGAAATTCGTGCGGTGGTACCTGAATTACTATTCTGGCGGGAAGAAAGCTGCTGAGTGA 1317 0.5406 MSQLKQMSHTDSAPSTPGKFKMDKASYFNRVRWHTSLAKLAVWSFVFLAAILIFFFRSPASSPVPADLSRRSLRTYNWGGPVWEKRVRASARVRSRNGFAVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVYIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAVVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKVIPIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVQFTHANISYAQRELGYKPTTDLQSGLKKFVRWYLNYYSGGKKAAE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2591 438 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 10 436 - -
Ssu4g2591 438 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Ssu4g2591 438 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 431 IPR036291 -
Ssu4g2591 438 Gene3D - 100 432 - -
Ssu4g2591 438 PANTHER EPIMERASE-RELATED 10 436 - -
Ssu4g2591 438 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Ssu4g2591 438 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Ssu4g2591 438 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Ssu4g2591 438 PRINTS Nucleotide sugar epimerase signature 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2591 Ssu-Chr4 65660263 65661579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2591 4 437 Miscellaneous Gene Families AT4G00110 87.558 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2591 K08679 - gmx:100790218 842.802