Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2585 ATGACATTGCTCAGTGCCTCCCCCACCCACCTCGCTCGAGATGTTGATGTTTCTGATAGTGAAGCCGTCGAAATTCTGAATCTTGCAGCCAAAGCTAGTGCTTTGGAGAGACCAAATGGGACTCACACCAATGTTGTGGGTGGTGGTCAGACTGCCTGGGATATGCTCAATGATGAAAAGTTTTCTTCTTACATTACCACATCTTGTGTGGATCTGGATAACATCCTTGGCGGAGGAATTAAGTGCAAAGAAGTCACTGAAATAGgTGGAGTTCCAGGCATTGGTAAAACACAAATTGGGATTCAACTTGCAGTAAATGTTCAGATTCCACAAGAATATGGTGGCCTAGGTGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTACAAATTGCTGAAGCATGCATTGAAGATATGGCAGAATACAGCCACCACTTTCACAAGGATTTTCAAGCTTGCAAAGTTAAAATGCACCCTAATAATATCTTggaaaatatattctattttcgTGTTTGCAGCTACACTGAGCAAATTGCTTTGGTAAATTACTTGGACAAATTCATCACGGAGAATAAAGATGTAAAAATCATCATTGTTGACAGTGTTACTTTTCACTTCCGCCAAGACTTTGATGATATGGCTCTCCGGACTCGATTACTCAGTGAAATGGCTTTAAAGTTGATGAAGCTTGCAAAAAAATTCTGTGTGGCTGTTGTTATGTTTAACCAAGTAACAACCAAGCATCTTGAAGGTTCATTTCAATTGACCCTTGCACTAGGAGATAGCTGGTCACATTCGTGCACAAATAGGATAATCTTGTTTTGGAATGGCAATGAACGACATGCATTTATTGACAAGTCCCCTTCTCTTAAATCAGCATCAGCTCCATATTCTGTGACCACTAGGGGGATACGTAATTCTACTTCAAGCTGCAAAAGAATCAAGATGATGTGA 972 0.3992 MTLLSASPTHLARDVDVSDSEAVEILNLAAKASALERPNGTHTNVVGGGQTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSHHFHKDFQACKVKMHPNNILENIFYFRVCSYTEQIALVNYLDKFITENKDVKIIIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFCVAVVMFNQVTTKHLEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTTRGIRNSTSSCKRIKMM 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2585 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 311 IPR027417 -
Ssu4g2585 323 Pfam Rad51 50 312 IPR013632 -
Ssu4g2585 323 CDD Rad51_DMC1_radA 65 311 IPR033925 GO:0003677
Ssu4g2585 323 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 7 323 - -
Ssu4g2585 323 Gene3D - 45 314 IPR027417 -
Ssu4g2585 323 ProSiteProfiles RecA family profile 1. 61 250 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Ssu4g2585 323 PIRSF Rad51 1 316 IPR016467 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g2585 Ssu-Chr4 65560061 65563251 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2585 K10870 - gmx:100527406 542.732