Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2571 ATGTTGTTTGCAACTAGAATGAAGTCATCCAGTTGCATGACAAGTGCCAAAGTTAAATCCCTTGATTATATCGGTTCAGGAGTGTCTAAAGTTGGCCTTGCTGCATTCTTTTACAAAACCATGTTTGGCCAGAAGCAATGCTCTCCATGCTTCTTTAGTTTTGCTCATCCTTGTTTAACTGTCAATTTCAAGAGGATGACATGGTCAGTTAGGAGCAGCATAAATGACAGAAGTTTCAGTCCTTCCACTTCAAATGGTACTAATGGAAGGACCCGCATAATTAGAGTGATTCAAGAGTTTCAGACCAAGTTAGGTTCTAAAATTCAGGAGGTAAAGAAAAATCTTCCGATGAAGCTGCTTTTCTTCTTGGTTGGATTTTATTGTGCAACTGCCTTTGCCACTGTTATTGGACAAACTGGTGACTGGGATATTCTATCTGCTGCCTTGGCTGTGGCTGTTGTGGAAGGCATTGGGGCTCTCATGTACAGGCCTTCTCTTCCTTTAGTTGGCAAGAATAGGAGCCTTATTTccttgtttaattattggaagGCTGGCCTTACACTGGGACTTTTCTTAGATTcctttaaatattga 594 0.3923 MLFATRMKSSSCMTSAKVKSLDYIGSGVSKVGLAAFFYKTMFGQKQCSPCFFSFAHPCLTVNFKRMTWSVRSSINDRSFSPSTSNGTNGRTRIIRVIQEFQTKLGSKIQEVKKNLPMKLLFFLVGFYCATAFATVIGQTGDWDILSAALAVAVVEGIGALMYRPSLPLVGKNRSLISLFNYWKAGLTLGLFLDSFKY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2571 197 PANTHER YCF20-LIKE PROTEIN 7 197 - -
Ssu4g2571 197 PANTHER - 7 197 IPR007572 -
Ssu4g2571 197 Pfam Protein of unknown function (DUF565) 138 196 IPR007572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2571 Ssu-Chr4 65259735 65260805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2571 - - gmx:100306594 358.607