Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2569 ATGCTACCCACTGGAGCAAAAGAGACCCAATTACGTGAGAGCAACAGTCAGAAGGTCCATCCTCAGCCCATGGAAGAGGCCATGAATCAGAATCCAGAAGCAGTGGAAACCctaatatctaaaatttttacaaatatctcTTCCCTGAAGTCAGCTTATATCCAGCTGCAAGCTGCTCATACTCCTTATGACCCTGATAAAATCCACACAGCTGATAAACTTGTTATTAGTGAGCTGAAAAATCTGTCTGAGCTCAAGCATTTCTACAGGGAGAACAACCCAAAACCAGTGTGTGTTTCTCCCCAAGACTCACGTTTAGCTGCAGAAATTCAAGAACAACAGAGCCTTCTGAAAACCTATGAGGTCATGGTGAAGAAATTCCAATCAGAAATCCAGAATAAAGATTCGGAGATCCATCAATTGCAGAAGCAGATTGAGGAAGCTAGCCAGAAGCGAGCAAAACTAGAGAAAAATCTGAAGCTTAGAGGTTTGTCAACCAAAGAATCAGAAGATGAAAATGGCTTTTTCCCTGTTGATCTAACCCCAGATCTCTTCACCTCTGCTATGGAAGCAGCTGCAAAAGCCATCCATGATTTTTCTAAACCTTTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGATGCTGCTGCCAACTCTATCGAACCTGATGTTGTTTATGCAAAGAGAGCTCATAAGAAATATGCATTTGAGTCTTACATATGCCAAAGAATGTTCAGTGGTTTTGAGCAGGAAAGCTTCTCTGTCAAATCAGACAATATTACTGTAACTAAAGAGAGCttcttccaccaatttcttgcTTTAAGAGAGATGGATCCCTTGGACATGCTAGGGCAAAATCCAGATTCCATATTTGGGAAGTTTTGCAGGAGCAAATACTTAATGGTAGTTCATCCAAAGATGGAGGCATCATTCTTTGGAAACTTGGATCAGCGAAATTATGTGATGGGTGGAGGGCATCCCAGGACTCCTTTTTACCAGGCTTTTCTTAAACTGACCAAGTCAATTTGGCTTTTACACAGGTTGGCTTATTCTTTTGAGCCAAATGTCAAGATATTTCAGGTTAAAGGAGGGAGCGAGTTCTCTGATGTTTATATGGACAGTGTGGTCAAGAATCTGATAATGGATGACAATGATGAAAAACCCAAAGTTGGTTTGATGGTTATGCCTGGATTTTGGATTGGGGGAAGTGTGATTCAGAGTAAAGTCTATCTCTCTGGTATGAAGGTCGCTGAATGA 1260 0.4032 MLPTGAKETQLRESNSQKVHPQPMEEAMNQNPEAVETLISKIFTNISSLKSAYIQLQAAHTPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQKQIEEASQKRAKLEKNLKLRGLSTKESEDENGFFPVDLTPDLFTSAMEAAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESYICQRMFSGFEQESFSVKSDNITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCRSKYLMVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKSIWLLHRLAYSFEPNVKIFQVKGGSEFSDVYMDSVVKNLIMDDNDEKPKVGLMVMPGFWIGGSVIQSKVYLSGMKVAE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2569 419 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 414 IPR040225 GO:0009639|GO:0009959
Ssu4g2569 419 Pfam Plant protein of unknown function (DUF641) 31 157 IPR006943 -
Ssu4g2569 419 Coils Coil 110 158 - -
Ssu4g2569 419 MobiDBLite consensus disorder prediction 8 24 - -
Ssu4g2569 419 MobiDBLite consensus disorder prediction 1 26 - -
Ssu4g2569 419 PANTHER MYOSIN-4 PROTEIN (DUF641)-RELATED 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2569 Ssu-Chr4 65242208 65243467 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2569 - - gmx:100499972 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2569 4 65242208 65243467 Ssu4g2569 4 65242208 65243467 ECH