Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2564 atgagggaaacTTGTCGGATTGCAAGGGAGGTGTTGGATGCAGCTGCTCGGATTATTCAGCCTGGTGTGACTACTGATGAGATTGACAGAGTTGTTCATGAGGCAACTATTGCTGCAGGTGGATACCCATCACCTCTCAATTACCATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACGTTGTAAATATTGATGTCACTGTGTACTATAAAGGTGTTCATGGTGATCTCAATGAAACGTACTTTGTGGGAAATGTTGATGAAGAGTCTCGCCAACTAGTAGAATGCACATATGAGTGCCTGGAGAAGGCAATATCCATTGGTATATCTCCATTGGATTTCAATTCTGATGTCTTTGTCTCTTGTCTAAgtttcaaatataattga 438 0.3973 MRETCRIAREVLDAAARIIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDVVNIDVTVYYKGVHGDLNETYFVGNVDEESRQLVECTYECLEKAISIGISPLDFNSDVFVSCLSFKYN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2564 145 Pfam Metallopeptidase family M24 1 123 IPR000994 -
Ssu4g2564 145 SUPERFAMILY Creatinase/aminopeptidase 1 123 IPR036005 -
Ssu4g2564 145 Gene3D Creatinase/methionine aminopeptidase superfamily 1 127 IPR036005 -
Ssu4g2564 145 PANTHER METHIONINE AMINOPEPTIDASE 1 128 - -
Ssu4g2564 145 PANTHER METHIONINE AMINOPEPTIDASE 1 1 128 - -
Ssu4g2564 145 PRINTS Methionine aminopeptidase-1 signature 55 68 IPR001714 -
Ssu4g2564 145 PRINTS Methionine aminopeptidase-1 signature 77 93 IPR001714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2564 Ssu-Chr4 65135868 65138946 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2564 K01265 - gmx:100785022 253.447