Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2563 ATGGACTGGCTCGGCCCACAAAACAGAGGGCCCAATGGGTTTAGTGAAAAACTGAACAAGCCAGACCCAAATTCAAAGGCACACAGACATTTCCTTGACCAACACGAAGTTATAAAATGTCTCCTTTCTCTTCCGCAGGATGCTTCAAGTTCTATTGCTTTGTCTGCAACTTCGGCTGCAACCCTAGCTTTCAGTTGTTTGCAATCAATGGCTGGTGAATCTGATGTACCCAAAAACACACTCTCTTGTGCTAACTGTGGCAAACCTGCAAATCTTCAaTGTCCAAAGTGCATAGAATTGAAGCTCCCTCGCGAAGGTTCTGCCTTCTGCACTCAGGAATGTTTCAAGTCTTCATGGAGCTTGCACAAATCCGTGCATCTGAAGGCAAAACAATCCTCACCTGGCACACAAAATTCAGACTCACTTGGTGAAGGTTGGTTGTATTGTATGAGGAGAGGGCAGGGTCGAACTCCAAAGATTCCTCACTTTGATTGGACTGGGTAG 504 0.4583 MDWLGPQNRGPNGFSEKLNKPDPNSKAHRHFLDQHEVIKCLLSLPQDASSSIALSATSAATLAFSCLQSMAGESDVPKNTLSCANCGKPANLQCPKCIELKLPREGSAFCTQECFKSSWSLHKSVHLKAKQSSPGTQNSDSLGEGWLYCMRRGQGRTPKIPHFDWTG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2563 167 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g2563 167 Gene3D - 69 132 - -
Ssu4g2563 167 Pfam zf-MYND-like zinc finger, mRNA-binding 84 127 IPR031615 -
Ssu4g2563 167 SUPERFAMILY HIT/MYND zinc finger-like 80 124 - -
Ssu4g2563 167 PANTHER METHIONINE AMINOPEPTIDASE 1 81 167 - -
Ssu4g2563 167 PANTHER METHIONINE AMINOPEPTIDASE 81 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2563 Ssu-Chr4 65133519 65135222 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2563 K01265 - gmx:100813779 195.667