Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2559 ATGAGGGATCCGAATCTGGAGTTGCAGGAATCGGGTTGGGAGGAGCTGCGTAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAGCTCTCTTCCTACGCCAAACTCGGCGCTCGCTTCACTCAAGGAGGTTATGTGGATGGTGGTTCACCACCTCTTGGATCCAGTAGGTCTTGGAAGTCCATGGAAATGGAAATCCAATCTTTGCTTGAGAAACTGTTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCAGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACACAGGAATTTAGGCGTATCAAGGGGAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACTGACTTTAAGACATCGGGCAGTATGTCACCAAGGATGCAGTTACTACGTGAGAGAGCTGCCATCCATGGAAATATATCTCatATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTGTTGGGTTCTCAGAGAGCATTGTTTGGTGATGTTCAAGGAAAAGTGAAGCTTCTTGGTGACAAGTTCCCCATCATTCGTAGCCTGCTTGGCTCGATAAGAAGGCGGCGCTCAAGGGATACTCTTATTCTGTCAGCAGTAATTGCTGCTTGTACGTTGTTTCTCATCATTTATTGGCTCTCAAAGTAA 720 0.4583 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGNISHIDDVISQAQATRAVLGSQRALFGDVQGKVKLLGDKFPIIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2559 239 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 239 - -
Ssu4g2559 239 PIRSF Golgi_SNARE 7 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Ssu4g2559 239 Pfam Snare region anchored in the vesicle membrane C-terminus 150 214 - -
Ssu4g2559 239 PANTHER GOS-28 SNARE- RELATED 4 239 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g2559 Ssu-Chr4 64942589 64951598 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2559 K08495 - gmx:100781813 430.254