Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2541 ATGGCGAAACACGAAACCTCTGATTCCGAATCCGAGGGTGACTCAAGTTCAGGGTCAGAGGAGGCACAAACCGTGGGCAATGGGAAGAAGGGCGTGTCGGAGTACGAGAAACAGAGGCTGTCGAGAATCGCGGAGAACAGAGCCAGGTTGGAGGCTCTAGGCTTGCCCCAAATGGCTTCCTCCTTGAAGAGTTCGCAACCTCACAACGCCAAGAAGGGCAAAGAAAAGGttaaagatgatgatgatgaagattatGTACCCGAAGACGAGGGAAAACCCGGATCAAGTTCTTCAAGTGAACACGATGAAGACCATAAAGATGGGgactttgaaattgaaaatgcttCTAAGTCACGAAAAAGGAAGGTGAAGAACAAAGGTTTGAAAATGAAAGCCAGAGTCTCTGGGAAGAAGCATGCTAGTAATTCAGAGTCCattgattatgatgatgatgatgaagcttTGAGGCAGGCAATTGCTCTTTCCTTGCAAGACTCTGCAGAAGGTTCTTATTTGCCGGACAAGAAAATAGTGAACATTAGCAAGACTGAGAAAAAGGGAAACAATCACATTCAAGAAGATAAGggaagaaagaagaacaaaaaatcGTTTGCTAGTCGGCTGCAACTGACCGAGGATGAGCTCGTTGTACACTTCTTCCAGCTTGATGGTAATTTGATAATGTCTGTACCTCctactttttgtttgttaagGACAAGGAATAATGGCAAGAGATCAATTGGAAGAGTCCTACTTATATCACCATCTATTATTCATCAAAGAGGAACTTTGTTTTCCCTGAAAGCTTCAGTGTATCATGCCCATATAAAAACTGCACTTGTTGAGGTGATTAGAGTTATATGTAAGCCAGCCATTTTGattcatttgattttaattggGAAACAATGA 909 0.3828 MAKHETSDSESEGDSSSGSEEAQTVGNGKKGVSEYEKQRLSRIAENRARLEALGLPQMASSLKSSQPHNAKKGKEKVKDDDDEDYVPEDEGKPGSSSSSEHDEDHKDGDFEIENASKSRKRKVKNKGLKMKARVSGKKHASNSESIDYDDDDEALRQAIALSLQDSAEGSYLPDKKIVNISKTEKKGNNHIQEDKGRKKNKKSFASRLQLTEDELVVHFFQLDGNLIMSVPPTFCLLRTRNNGKRSIGRVLLISPSIIHQRGTLFSLKASVYHAHIKTALVEVIRVICKPAILIHLILIGKQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2541 302 MobiDBLite consensus disorder prediction 181 202 - -
Ssu4g2541 302 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 150 169 IPR003903 -
Ssu4g2541 302 MobiDBLite consensus disorder prediction 1 149 - -
Ssu4g2541 302 MobiDBLite consensus disorder prediction 119 136 - -
Ssu4g2541 302 MobiDBLite consensus disorder prediction 32 46 - -
Ssu4g2541 302 MobiDBLite consensus disorder prediction 12 26 - -
Ssu4g2541 302 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2541 Ssu-Chr4 64065996 64067712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2541 29 223 EF-hand Containing Proteins AT1G73440 37.436 3.46e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2541 - - var:108347013 295.049