Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2523 atggcttcttcttcttgtctgACAATATCCCCAAGGAAGCTGCGCTATGATCTGTATTCCTTTTCATACAAAGAAGATTCCAACACCCCATTAGTGATAAACGTTCTGGCTTCACTCATTGAGAGGAGCATGGCTAGGACACAAAGGATTGTGAAGAACTGTTCCAATGCTTTGTCCAAAGCCATCAGCACAAACATCTTTGATTGTAGGGAGATTCCTGATATGACCATCCAATCCTATCTAGAGAGAATTTTCAGGTACACTAGAGCAGGACCATCAGTGTATGTTGTGGCCTATGTCTATATTGACCGGTTCTGCCACAACAATCCTGGGTTTAGGATCAATGCCAGAAATGTGCATAGACTTCTCATAACAACTATTATGGTGGCTTCTAAGTATGTAGAAGATATGAATTTCAGGAATTCATACTTTGCAAGAGTTGGTGGGTTGACAACAAATGAATTGAATGAGTTGGAGCTTGAATTTCTTTTCTTGATGGGTTTCAAATTGCATGTGAATGTGAGTGTGTTTGAGAGCTATTGCAGCCATTTGGAGAGGGAAGTCAGCATTGGAGGAGGGTACCACATTGAGAGGACCCTAAGGTGTGCTGAAGAGATCAAATTAGCGAGGCATATAGAGGAAAGGGGTTACACACAAATCGCGCGTGTAATGTTGTAG 678 0.4056 MASSSCLTISPRKLRYDLYSFSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNALSKAISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCHNNPGFRINARNVHRLLITTIMVASKYVEDMNFRNSYFARVGGLTTNELNELELEFLFLMGFKLHVNVSVFESYCSHLEREVSIGGGYHIERTLRCAEEIKLARHIEERGYTQIARVML 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2523 225 SUPERFAMILY Cyclin-like 79 171 IPR036915 -
Ssu4g2523 225 Gene3D - 22 215 - -
Ssu4g2523 225 PANTHER UNCHARACTERIZED 2 224 IPR013922 GO:0000079|GO:0019901
Ssu4g2523 225 Pfam Cyclin 58 170 IPR013922 GO:0000079|GO:0019901
Ssu4g2523 225 PIRSF PREG 6 221 IPR012389 -
Ssu4g2523 225 PANTHER CYCLIN-U2-1 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2523 Ssu-Chr4 63669084 63670357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2523 - - gmx:100775375 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2523 4 63669084 63670357 Ssu4g2523 4 63669084 63670357 ECH