Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2455 ATGGAAGAAACCATCATGTTGAGGAGAGAGCCTCTGCTCGCCCAACAAGAAAACCCATCTTCTCTAATCAATCACTTGTATATTGGTCACTTCTTAGCTAGATGGGGTGCCAGGATGTGGGAATTCTCTGTTGGTTTATACATGATCAACATTTGGCCAGACTCGTTGCTGTATGCGGCAATATATGGTGCCATTGAATCTGCCTCCATTGCACTGTTTGGTCCCATAATTGGAAGATGGGTTGATAAGTTGTCTTATGTGAAGGTTTTGCAATTGTGGTTGGTGACACAAAATCTCTCTTTTATTGTTGCTGGGGCAACTGTACTTGCTTTACTTGTCAACTCATCTTTGAAGTTTACAAATTTCTCAGCTTTCATATTGCTGGTGTTGACAATCAATATCTGTGGTGGCATTGGTGTACTTTCAACTCTTGCCGGCACAATCTTGATTGAAAGAGAATGGTTGTTAGTTATAGCTGAAGGTCAACCCCCAGAATTTCTGACAAAGATGAATTCAGTTACAAGACGCATTGATCTAACCTGCAAGCTTCTTGCTCCTGTTGTTACTGGGTTCATAATAAGCTTTGTATCACTAAAAGCATCTGCTATAACTTTAGCACTGTGGAATACTGTGTCTGTTTGGGTGGAGTATCGGCTTTTCACATCTGTATATAATGGGATTCCAGCTTTGGCCGAAAGTAGCCGGAGGAGGATGGCAAGACTTTCACAAAGTGATCAGGAAAGGAACAATCCAACTTTGGAGGAAGATAGTTTGCTTTCTGTTGCTGGTGGTAGCTCAGAATTGGCAGATAGAAAAAgcagtaaaaaaatttctgagAAGATTTCGGAGATTCCTTATATTGCTGCATGGAGAGTTTATTTACAGCAAGAAGTTGCCCTTCCTGGACTAGCTCTGGCTTTGCTATTTTTCACTGTACTCAGCTTTGGAACTTTGATGACAGCCACCTTAGAATGGGAAGGCATACCTGCATATGTTATTGGAATAGCAAGAGGAATAAGTGCTGTGATTGGAATAGCTGCAACAGTTGTATATCCTGTGCTACAGTCTCATATATCAACTATTAGAGCTGGACTTTGGTCTATATGGTCTCAGTGGACTTGCCTCCTTCCATGTGTAGCTGCAATATGGATCCAAAATGGCTTTCTATCATCATATATTCTGATGGGAAGTGTAGCCATATCTCGGCTTGGACTGTGGATGTTTGATTTGTCTGTGCTTCAACAAATGCAGgatcTAGTTCCTGAATCTGATCGTTTGATTGTTGGAGGTGTTCAGAACTCACTTCAGTCAATAATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAGTTGACGTTATTATCATTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGCATCCATGCATACCATGTACGAAAGCACCTCTTCCACTTTGACCAAGTATTGTGGGGTAAATGTTTTGTAAGAGCATCTTAA 1506 0.405 MEETIMLRREPLLAQQENPSSLINHLYIGHFLARWGARMWEFSVGLYMINIWPDSLLYAAIYGAIESASIALFGPIIGRWVDKLSYVKVLQLWLVTQNLSFIVAGATVLALLVNSSLKFTNFSAFILLVLTINICGGIGVLSTLAGTILIEREWLLVIAEGQPPEFLTKMNSVTRRIDLTCKLLAPVVTGFIISFVSLKASAITLALWNTVSVWVEYRLFTSVYNGIPALAESSRRRMARLSQSDQERNNPTLEEDSLLSVAGGSSELADRKSSKKISEKISEIPYIAAWRVYLQQEVALPGLALALLFFTVLSFGTLMTATLEWEGIPAYVIGIARGISAVIGIAATVVYPVLQSHISTIRAGLWSIWSQWTCLLPCVAAIWIQNGFLSSYILMGSVAISRLGLWMFDLSVLQQMQDLVPESDRLIVGGVQNSLQSIMDLLAYVMGIIISDPRDFWKLTLLSFLAVTLAAFLYCIHAYHVRKHLFHFDQVLWGKCFVRAS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2455 501 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 22 498 IPR009716 GO:0005381|GO:0016021|GO:0034755
Ssu4g2455 501 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 22 498 - -
Ssu4g2455 501 Pfam Ferroportin1 (FPN1) 22 467 IPR009716 GO:0005381|GO:0016021|GO:0034755
Ssu4g2455 501 SUPERFAMILY MFS general substrate transporter 25 483 IPR036259 -
Ssu4g2455 501 CDD MFS_SLC40A1_like 26 477 IPR009716 GO:0005381|GO:0016021|GO:0034755
Ssu4g2455 501 Gene3D MFS general substrate transporter like domains 22 477 IPR036259 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2455 14 499 Organic Solute Cotransporters AT2G38460 58.418 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2455 K14685 - gmx:100802561 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2455 4 61628105 61651272 Ssu4g2455 4 61628105 61651272 ECH