Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2446 ATGATGCATACTTCTATAAAAGAGATGCCTAGGGGAATGGGAAAATTAAACCATTTACAGcatttgaatttctttattgTGAGCAAGCATGAGGAGAATAAGATCAAAGAATTGGGAGGACTTTCAAATCTTCACGGTTCGCTTTCTATTAGAAATTTGGAGAATGTTACCAAAAGTGATGAAGCACTGGAGGCTACGATAATGGATAAGAAGCACGTTAGTAGTTTATCCTTGGAATGGTCTATACGTAACAACAATGGCATAGACTTCCAAATTGAATTAGATGTACTCTGCAAGTTACAGCCTCACCGAGACCTGGAATCGCTATCAATAAGTGGTTATAAAGGAACCAGATTTCCAGATTGGGTGGGAAATTTTTCCTACCGCAGTATGACTCATCTAAGCTTATGTAATTGTATCAACTGTTGGATGCTTCCTTCACTTGGGCAACTACAATCTCTCAAGACACTCACTATTTCAAACTTGAATTCGGTGAAGACTATTGATGCAGGTTTTTACAAGAATGAAGATTGTTCTTCCATGACACCCTTTCCCTCCCTTGAATCTCTAGACATTTATGACATGCCTCGTTGGGAGGTGTGGAATTCCTTTGATTCTGAAGCTTTTCCTGTACTTAAGGATCTTGAAATACGTTACTGCCCCAAACTAAAGGGAGATTTGCCAAATCACCTTCCTGCTCTGAAAACACTTACAATTGAAAATTGCGAGCTTCTTGTCTCTTCTCTCCCGAGTGCTCCCGCCCTTCGAGGAGTACGGATATGTAATAGCAATAAAGTAGCGCTGCATGTGTTTCCTCTTTTGGTGGAATCTATAGATATAGAAGGAAGCCCAATGGTGGAGTCCATGATCGAGGTCATCAATAACATCCAACCAACTTGCCTCCAATCTTTAACATTATCGGATTGTTTGTCAGCCATATCTTTCCCGGATGGTCGTCTACATGCATCGCTGAAGACTCTGAATATCCACGGACTTAAAAATCTGGAATTCCCGACACAACACAAACACGAGTTACTGGAATCACTGTCTATTAACGATAGTTGTGATTCGCTCACGTCTCTTCCACTGGGTACCCTTCCAAATCTCAAAAATCTCGAAATCAGACTCTCTGAAAATATGGAATCTCCTTTGGGTTCGGGATCAGAGTCATTTAAGAGTCTGAGTTCTTTTGAGATTTGCATGTGCCCCAACTTTGTATCATTCCCGAGAGAAGGATTGCCTGCGCCCAATTTGACTCGTTTCATAGTTTCCCATTGTGCCAAGTTGAGGTCGTTGCCTGATGAGATGAGTACTCTTCTCCCAAAGTTAGAATATCTTAACATATCCAACTGCCCGGAAATTGAGTCGTTTCCTGGAGGGGGTATGCCACCTAACTTGAGAACAGTTATAATCATCAATTGTGAGAAACTACTGAGCGGCCCAGCATGGCCATCCATGGACATGCTTACCTCTCTCCATGTCTGGGGTCCATGTGATGGCATCAAGTCCTTCCCAAAGGAGGGTTTGCTGCCTCCCTCCCTTACGCATCTGGATCTATGTAACTTCTCAAGTCTGGAGACGTTGGACTACAAGGGGCTTCTCCATCTCACATCCCtgcaaaatttagaaattgaagaCTGTCAAAAGCTGGAGAATATGGTGGGAGAAAGGCTGCCTGTCtctctaataaaattaatcatacgGGAATGTCCTTTGCTGCAAAAACGATGCCGCACGAAGCACCGTCAAATTTGGCCTAAAATTTCCCATATCCGTGGCATTAAGTTTGTCTGTGTAGTTAGAGCCAAGATTTTACTTAGTATTGTGGTGAATATGAGGGCAAAAGGAGGAGGAAGTGAGGGCAAGGAAACTCTAAACTTTATGGCAGATGTGACATTTTCCTCTGCTTTTAGTTCAAATGAATCTTCTGGGGAAGACACTGAGCTGCTGAAGTATCTAAACTTGAGTATTTTCAGTATGGACATGCTGGCCCCCCCTTCTGCTGGGGATCTGAAAGATTTACGTGGTGTCATTCTTTTGTGGTTTTGTTGTAAATCAATCAGCAATGGTAATGGTGTTGACGGTCATGGTAGTGGCGACGACAGTCATGGCGGTGGTGGCGGCGATGGtcatgacgatggtggtggaggtgatggtGATGGATTATCGACAATCTTGAAGAACAGTGACATGATAATCGagatcttttag 2211 0.4129 MMHTSIKEMPRGMGKLNHLQHLNFFIVSKHEENKIKELGGLSNLHGSLSIRNLENVTKSDEALEATIMDKKHVSSLSLEWSIRNNNGIDFQIELDVLCKLQPHRDLESLSISGYKGTRFPDWVGNFSYRSMTHLSLCNCINCWMLPSLGQLQSLKTLTISNLNSVKTIDAGFYKNEDCSSMTPFPSLESLDIYDMPRWEVWNSFDSEAFPVLKDLEIRYCPKLKGDLPNHLPALKTLTIENCELLVSSLPSAPALRGVRICNSNKVALHVFPLLVESIDIEGSPMVESMIEVINNIQPTCLQSLTLSDCLSAISFPDGRLHASLKTLNIHGLKNLEFPTQHKHELLESLSINDSCDSLTSLPLGTLPNLKNLEIRLSENMESPLGSGSESFKSLSSFEICMCPNFVSFPREGLPAPNLTRFIVSHCAKLRSLPDEMSTLLPKLEYLNISNCPEIESFPGGGMPPNLRTVIIINCEKLLSGPAWPSMDMLTSLHVWGPCDGIKSFPKEGLLPPSLTHLDLCNFSSLETLDYKGLLHLTSLQNLEIEDCQKLENMVGERLPVSLIKLIIRECPLLQKRCRTKHRQIWPKISHIRGIKFVCVVRAKILLSIVVNMRAKGGGSEGKETLNFMADVTFSSAFSSNESSGEDTELLKYLNLSIFSMDMLAPPSAGDLKDLRGVILLWFCCKSISNGNGVDGHGSGDDSHGGGGGDGHDDGGGGDGDGLSTILKNSDMIIEIF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2446 736 SUPERFAMILY L domain-like 253 589 - -
Ssu4g2446 736 MobiDBLite consensus disorder prediction 694 722 - -
Ssu4g2446 736 SUPERFAMILY L domain-like 3 258 - -
Ssu4g2446 736 Gene3D Ribonuclease Inhibitor 462 587 IPR032675 -
Ssu4g2446 736 Gene3D Ribonuclease Inhibitor 319 461 IPR032675 -
Ssu4g2446 736 Gene3D Ribonuclease Inhibitor 1 265 IPR032675 -
Ssu4g2446 736 PANTHER OS11G0677101 PROTEIN 178 266 - -
Ssu4g2446 736 PANTHER OS11G0677101 PROTEIN 481 589 - -
Ssu4g2446 736 PANTHER OS11G0677101 PROTEIN 419 467 - -
Ssu4g2446 736 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 178 266 - -
Ssu4g2446 736 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 481 589 - -
Ssu4g2446 736 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 419 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2446 Ssu-Chr4 61467956 61479848 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2446 - - gmx:100813244 856.284