Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2435 ATGGACGACCCCCCGTTGCAGAAGATCGCGATTTCCGGCCCCACATTAGCCTCCCTCATCCAGCGCTTCTCCACCGCGCCCTCCGCCGTGGACGGCCTCCTCTTCGGCCACGTCACCCCTCTCCCCCTCACCCTCTCCGACgactcctcctcctcctccgccgACCCCGCCCTCCTCGCCACCGTCACCGGCTTCCTCTGCTCCCCCTCCTTCTACGACTCCTCCGGCGCCGTCCTCCCCGCCGCCCTCCGCCCCCACTCCTCCCTCCTCGGCTGGTTCTCCGGCCGGCGGCGCTCCCCCATCCGCCCCTCCATGCGCGAGTTCTCCGTCAGCACCTCCCTCTCCTCCCTCTCCCAATTCGCCTCCCGAATCGAGAGCTCGGACTCCCCCTCCCTCTTCCCCCCCTGCGTCTTCCTCCTCCTCGCGTCCCCCCACTCCGACCACTCGCACGTGCACACGCACGAGTACCGCGCCTTCCAGTTCCGCGCGGGGGCCCGCCGCTTCGAGCCCAGGTCCGTCGACGTCGTCAACATCGGGCCCGCCTTCCGCGGCCACTATGGGGCCTTCAGCCCCAGTTCGAGGCTCCCGGCGCTCGACTGCGGGCTCCGGGGCTCGCCGATGAGCGACGGCGGGGACGAGGAGCGGCTGGGCCGGATGAGGCAGGCCGCCAAGGATCAGCGGGAGATGGACGGGTGCGCGGAGGGGTTTGATGTGGGGAGGCTCGGCAGAATGATGGGGTCGGAGGCCAGGAGTTACACCGAGGGTTTGGAGGAGTTGTATCAGAAAATGCTTGTGAAAATTGAGAACTTGACCGGCTTGGTGGAGAAGAGTTCCGCTAAGGTTCTTGAGCAGGAAAGTCATAATAGGAAGTTGAaacacaaaattttgagatctGCTGCCTCAGAATAA 909 0.6359 MDDPPLQKIAISGPTLASLIQRFSTAPSAVDGLLFGHVTPLPLTLSDDSSSSSADPALLATVTGFLCSPSFYDSSGAVLPAALRPHSSLLGWFSGRRRSPIRPSMREFSVSTSLSSLSQFASRIESSDSPSLFPPCVFLLLASPHSDHSHVHTHEYRAFQFRAGARRFEPRSVDVVNIGPAFRGHYGAFSPSSRLPALDCGLRGSPMSDGGDEERLGRMRQAAKDQREMDGCAEGFDVGRLGRMMGSEARSYTEGLEELYQKMLVKIENLTGLVEKSSAKVLEQESHNRKLKHKILRSAASE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2435 302 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Ssu4g2435 302 PRINTS Protein family FAM175 signature 172 186 IPR023238 -
Ssu4g2435 302 PRINTS Protein family FAM175 signature 91 107 IPR023238 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 1 18 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 257 283 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 43 67 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 234 254 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 208 228 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 180 200 IPR023241 -
Ssu4g2435 302 PRINTS Plant protein family FAM175 signature 143 163 IPR023241 -
Ssu4g2435 302 PANTHER ABRAXAS FAMILY MEMBER 1 296 IPR023238 -
Ssu4g2435 302 MobiDBLite consensus disorder prediction 282 302 - -
Ssu4g2435 302 PANTHER OS07G0540200 PROTEIN 1 296 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2435 K20799 - gmx:100798241 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2435 4 60941987 60945290 Ssu4g2435 4 60941987 60945290 ECH