Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2419 ATGTCTTCCATCAACTTCAACCCCTTCGGGGCAAACTGGTTCTCAAAACCCCCCAACCCACTCCCTCTCCCTTCCCTCCCCAACACCCTCAACCTCCCGGACCCACCCTCCCCCCATCCCAACTTCGCCGCCATCAGCCTCCCCAACCTCTTCCGCCGCAAGCCCAAGAAAAAGCCCGACCCCGCGGAGCCCGGCCCGTACGAGCAGCTGGCCCAGCAGGTCCTCTGGGAGTGCGAGACCCTCCCGGACCACCGCCACACCCCGGAGGTCGAGAAAATCCTGAGCAGGAACGGCTCCTCCTCCGTCTTCGAGGAGCGCGAGGACGCGACGGAGGAGGAGATGCGGGAGAACGCGGAGCTCGTGGAGAGGCTGAGGAGCAGCCCCGTGGTGCAGTTCGTGGCGCGCGCGGAGGAAATCCTGGACAAGATGAACGAGATGGAGCTGAAGGAGAACGAGAGGCCCTACCACAGGGAGGACTGGGGGCTCTGGAAGGACGTGCCGCACGTCACCGGGCTCGACGGGAGGCCCATGCCCCGCAAGGCCCAGAAGACCAAGCAGGAGGCGGACGACAAGTTCTGGGACTTCGCCAGGCAGTTCTTCTTCGGGCTCTGGAATTTCAGGCAGAGGCCGTACCCTCCCGGGAAGCCCATCGACGCCGCCCAATCCATCGGGTACAAGAACCTCGAGAGGCGCTACTATGACTTTATCATGAGGAGTGGTGGATGGTACTATAAGGATCGGCTGGGTCGCACACGAGGACCATTAGAGTTGATTACACTTAAAACTGCGTGGGGTGCTGGGATTATTGATAAGAACACTTTCATTTGGGGTGAGGATATGGATGAATGGGCACCCATCCACATGATTTATGGAATGGAGCGTGCAATTGCTACTTGGGAAGTTAGACTTGCTGCTTCAGCAACAGCATTGCTTCACAAACTACAAAAAGGTATACCACCGTGGGTTCCTCTGAAAGGATTTGAAAAGAAGACCTATAAGCAGCTTCAAGAAGAGGCTATAGAAAGCAAGAGACGTGATTTAGCAGTATTGGAAGCTAATGATGGCCTTTGGCCCGGAGAGAGAATTCCAAGTCATGCCCTATTTCTTTGGGCTAGTGGCTCTGAACTGACCACTATCTTGGAACAGGATCACATGCCGAACAAATACATTCCCAAATATCTTAGAAAGAAGTTGGCAGAAATTATTCCAGGGTTGAGGCCATGGGAAGTTCTGAGCATAGAACAAGCAATGGATCGATTAACATTTAACGGTGAATGGTACCGTGAACCACTTGGTTCATACACCACTGGTCCCCCTTACCTCCAGCACTGGAATAGAGATGTTATGagattatataagatatttgaTGATCTTAACACTGAGTTGTACGAACAAATGGAGAGTTCAATTGCTGGCTTTGATAAAATTATGGAGAAGATCAGGCAGGATTTTATAGCAAGAACTGATAAACTGTTGGAGAAGAAAgacaaagagaaaagagaagcacGCAAGAAAGCTGGGTTGCCCGAGTATGAGTGGCCTGAAAAACCATACAACCCTTAG 1563 0.5176 MSSINFNPFGANWFSKPPNPLPLPSLPNTLNLPDPPSPHPNFAAISLPNLFRRKPKKKPDPAEPGPYEQLAQQVLWECETLPDHRHTPEVEKILSRNGSSSVFEEREDATEEEMRENAELVERLRSSPVVQFVARAEEILDKMNEMELKENERPYHREDWGLWKDVPHVTGLDGRPMPRKAQKTKQEADDKFWDFARQFFFGLWNFRQRPYPPGKPIDAAQSIGYKNLERRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKNTFIWGEDMDEWAPIHMIYGMERAIATWEVRLAASATALLHKLQKGIPPWVPLKGFEKKTYKQLQEEAIESKRRDLAVLEANDGLWPGERIPSHALFLWASGSELTTILEQDHMPNKYIPKYLRKKLAEIIPGLRPWEVLSIEQAMDRLTFNGEWYREPLGSYTTGPPYLQHWNRDVMRLYKIFDDLNTELYEQMESSIAGFDKIMEKIRQDFIARTDKLLEKKDKEKREARKKAGLPEYEWPEKPYNP 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2419 520 Coils Coil 333 353 - -
Ssu4g2419 520 MobiDBLite consensus disorder prediction 496 511 - -
Ssu4g2419 520 MobiDBLite consensus disorder prediction 90 111 - -
Ssu4g2419 520 Pfam GYF domain 2 242 288 IPR025640 -
Ssu4g2419 520 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 510 IPR037471 -
Ssu4g2419 520 MobiDBLite consensus disorder prediction 15 42 - -
Ssu4g2419 520 Coils Coil 485 505 - -
Ssu4g2419 520 MobiDBLite consensus disorder prediction 1 66 - -
Ssu4g2419 520 MobiDBLite consensus disorder prediction 496 520 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2419 - - gmx:100801248 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2419 4 60416388 60422056 Ssu4g2419 4 60416388 60422056 ECH