Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2414 ATGGATTGGAAACGTCCTAGAAAGTTAAACTTAAATGCACCCCTTTTGTCAACAAGGCGTCTTGGTTGTTCTATTGTTGCAGATGCATCTTGCTCATCAAATTCAGTTGGTGCAGGCCAAAATACAAGTGAAAGAGTTCCATTTTCATGGGAGAAAGCACCAGGCAAGCCAAAAGACACTGAGAGGAGCGATAACACCCAAGACGGAGGCACGCCTCGCCTAAGACTACCGCCCCACCATCCGTTTCCTCCGAAAGAAGCAGCTAAAGCTGATGTTGATgttgatgatggtgatgatgcaTTTCATGATCAAGGAGATGGTAGTTGTGATGGCAATGACAACCAGGATGATGTTTTCTCAGATGCTGTGGATGTTTTCTCTCTATCAGAGGCATTAGATATTATCCAAAGGAAATCAGAGAATGCTCATAGTGAAAACAATGACAGCTATCCAGAGTGTTACATCTCAGGGTCAGCAAGGCATTCATATGCTTCTTCTCCAAAGGGTTGTGGCTTGGAACTTCTCTTCCCCTGGCGTGTGAAACATAAGCTTTGTGCTATAGAGAGCCCTGTGTTGCCATGCTCCACTAATATGCACAAGCATCAGCGCAGCTCAAAACAGAAGAAACATCGTTCATCAGCCTACATTCCTTGTACAAACGGGAGAGATATTTGA 675 0.4311 MDWKRPRKLNLNAPLLSTRRLGCSIVADASCSSNSVGAGQNTSERVPFSWEKAPGKPKDTERSDNTQDGGTPRLRLPPHHPFPPKEAAKADVDVDDGDDAFHDQGDGSCDGNDNQDDVFSDAVDVFSLSEALDIIQRKSENAHSENNDSYPECYISGSARHSYASSPKGCGLELLFPWRVKHKLCAIESPVLPCSTNMHKHQRSSKQKKHRSSAYIPCTNGRDI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2414 224 Pfam Protein of unknown function (DUF688) 6 130 IPR007789 -
Ssu4g2414 224 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 148 221 - -
Ssu4g2414 224 MobiDBLite consensus disorder prediction 31 115 - -
Ssu4g2414 224 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 4 149 - -
Ssu4g2414 224 MobiDBLite consensus disorder prediction 31 47 - -
Ssu4g2414 224 PANTHER DUF688 FAMILY PROTEIN 4 149 - -
Ssu4g2414 224 PANTHER DUF688 FAMILY PROTEIN 148 221 - -
Ssu4g2414 224 MobiDBLite consensus disorder prediction 51 68 - -
Ssu4g2414 224 MobiDBLite consensus disorder prediction 79 106 - -
Ssu4g2414 224 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2414 Ssu-Chr4 60200247 60201068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2414 - - gmx:102661002 303.908