Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2364 ATGACAGAATCAGAGGAGAGAGCCACGGTGACGTGGGTCAACATCCCCATCCTCAAATCCTCCCTCGACGACGTCGTTCTTTCCCGCCCCCACAACCTGCTCCGAAACGACGCCGTCCTCGGCTTCGCACCCGTCGGTGGCACCCGCTGTAAATTCGCGAGCGTGTCGATGGCAGAGAGGAAATTCGACAAAGAGTTCGCGCCGACGCCGACGCAGCTTCTGCAGCACCCGCTTGCCGCAGTAGCTTTGGTGCCGAAAGACGCCGCCCTGTTCCTTGCCGGAGCCATCGCCGGCGCAGCCACGAAATTTTTCACCGCGCCTCTCGACCGCATCAAGCTCCTCATGCAGACTTACGGCGTGCGAGTTGGACAAGAAAGTGCCAAGAAGACGATTGGTTTGATTGAGGCCATAACTGTAATAGGGAAGGAAAAAGGCATTAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTCATTCGGATTATACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAAATTTACAagaaaatattcaagggaAAGGATGGTGAGCTCTCTGTGGTGGGAAGACTTGTAGCAGGTGCTTTTGCTGGCATGACATCAACTATCATAACTTACCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAGCCTGGTTATCAAACAATGTCAAAGCGTCTTTTGCCATGCTTACATGCTATCCTTTGGACACAGTGCGAAGACAGATGCAATTGA 738 0.5108 MTESEERATVTWVNIPILKSSLDDVVLSRPHNLLRNDAVLGFAPVGGTRCKFASVSMAERKFDKEFAPTPTQLLQHPLAAVALVPKDAALFLAGAIAGAATKFFTAPLDRIKLLMQTYGVRVGQESAKKTIGLIEAITVIGKEKGIKGYWKGNLPQVIRIIPYSAVQLFAYEIYKKIFKGKDGELSVVGRLVAGAFAGMTSTIITYPLDVLRLRLAVEPGYQTMSKRLLPCLHAILWTQCEDRCN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2364 245 PANTHER SOLUTE CARRIER FAMILY 25 7 230 - -
Ssu4g2364 245 PANTHER ADP/ATP CARRIER PROTEIN 7 230 - -
Ssu4g2364 245 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Ssu4g2364 245 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Ssu4g2364 245 PRINTS Mitochondrial carrier protein signature 90 103 IPR002067 GO:0055085
Ssu4g2364 245 PRINTS Mitochondrial carrier protein signature 103 117 IPR002067 GO:0055085
Ssu4g2364 245 ProSiteProfiles Solute carrier (Solcar) repeat profile. 85 177 IPR018108 -
Ssu4g2364 245 Gene3D Mitochondrial carrier domain 87 239 IPR023395 -
Ssu4g2364 245 SUPERFAMILY Mitochondrial carrier 88 235 IPR023395 -
Ssu4g2364 245 Pfam Mitochondrial carrier protein 184 235 IPR018108 -
Ssu4g2364 245 Pfam Mitochondrial carrier protein 90 180 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2364 Ssu-Chr4 57791931 57794764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2364 5 233 Organic Solute Cotransporters AT3G51870 62.605 3.42e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2364 K14684 - gmx:100796878 348.977