Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2352 ATGACGGATCCGACAGCCGAAAACCAATTGGAAAGATGGCTTTCTCCTGTTAAAACGATGTTGGGTACCCTAACACACAAACGAGTCAGAGCAAATAGCATTTCAGATGTTCCAGAACAACTTAAAAGATCGAATGTGGGAGCTTACAAGCCAAAGGTGGTCTCCATAGGACCCCTACACAGGAAATCTAGTAGGGACCTGCTATACATGGAAGAGATCAAATGGCAATGCATGCTGTCTCTTCTTTATCGAACCGATGATCCTGAAGAACGCTTGACCAAATGCGGCAAAGCCATTTTAAACTATGAAGAGGCAGTCCGCGCGTGCTACATGGACCCCATCGAAGTCGACAGCAACGAACTCGCCAAATTCATGTTGTTAGATGACTGTTTTCTGCTGGAGCTTCTTCTCATCTGTAACAACGAGCACTTACATGACGAACGAGGAAACCAATTCCCTGTGACGGTCGGAAAAATGGAAGAGTTCCTGTCTGATTTGAAATTACTTGAAAACCAGATACCTCTGTTCGTTATCGAATTGTTGTATATAAAACTGTTCGTGGAAAATCTTAGAGAGGATACGAAACCATCTAAAGAGGAATGGGACAGGAGCTCCAAGAAAGTCAGTGGCCATGCACTGTTTCTCTTTGGTTGCCGTTGCCCTTCTGCCTCGAGCCCTGTAAATAGCCCAAATAGGGTACACTTTGTTGAACTCACGCACTGGTTCTTAGCTAAACCAGAGCAAGAACGCAGCGCCCAAGCTGTGGAGCTTACAATTGAGCCTCACAATGATCCTGTTGCAAGATGTGACAAAAAAATCAGCAAAGAAACTAAACCAAAATTAGAACGCTGCCCTGCTAGGCTCCAAGCTGCAGGGGTTAACGTTACGCCCTTAAACCGTCAGAGCGGAAGCAGTGATATCATGTTTGGCTGTTTGGTTTGTTGTGAATACGACGTAGAACTGCTTAAAAGTAAAGAAGTCTTACTGGTACACGATGAAAACAAGTGGAGCAATGAGAAGTTGAAGAAGTTCATTCATGACATCGCCGACGGAATTCAAATTGATGCGAGTGCGGATCCTGAATTTTGTCTGATGATTAAGGATTTGAACAAGTGTGGGAGTGAAAAAGGAAATTGTAACATCATCATGTTCGAGTATCATTGCCGAATCGTTCTCACAAAAGCAAGGAAAATGTGCAGATACTTGTTCGCCACTTTGAAACGTGACCATATTTCCACACCGTGGAAAACTTTAGGAGTAATGGTTGCTGTCCTGCTGCTTCTTCTCACCATCGCGCAGACTGTTCTTGCAGCCATTGGCCTCGAGTCCAGGCTACATATAGTATTCGCAGATTTGCAGTGTGTGACGTATAATGAATTGTATCAGTTGGCTTTCTCCTCCACTAATGTCCTGTCTCGTTTGTTTGTCTATGatgtataa 1440 0.4389 MTDPTAENQLERWLSPVKTMLGTLTHKRVRANSISDVPEQLKRSNVGAYKPKVVSIGPLHRKSSRDLLYMEEIKWQCMLSLLYRTDDPEERLTKCGKAILNYEEAVRACYMDPIEVDSNELAKFMLLDDCFLLELLLICNNEHLHDERGNQFPVTVGKMEEFLSDLKLLENQIPLFVIELLYIKLFVENLREDTKPSKEEWDRSSKKVSGHALFLFGCRCPSASSPVNSPNRVHFVELTHWFLAKPEQERSAQAVELTIEPHNDPVARCDKKISKETKPKLERCPARLQAAGVNVTPLNRQSGSSDIMFGCLVCCEYDVELLKSKEVLLVHDENKWSNEKLKKFIHDIADGIQIDASADPEFCLMIKDLNKCGSEKGNCNIIMFEYHCRIVLTKARKMCRYLFATLKRDHISTPWKTLGVMVAVLLLLLTIAQTVLAAIGLESRLHIVFADLQCVTYNELYQLAFSSTNVLSRLFVYDV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2352 479 PANTHER DUF247 DOMAIN PROTEIN 304 439 - -
Ssu4g2352 479 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 13 296 IPR004158 -
Ssu4g2352 479 Pfam Plant protein of unknown function 308 429 IPR004158 -
Ssu4g2352 479 Pfam Plant protein of unknown function 34 307 IPR004158 -
Ssu4g2352 479 PANTHER DUF247 DOMAIN PROTEIN 13 296 - -
Ssu4g2352 479 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 304 439 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2352 Ssu-Chr4 57301166 57302776 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2352 - - gmx:102663743 409.453