Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2347 ATGTCATCATCCTTCGGCAGCTCCGGCCAGCCGTTCGACGACGACGGCGCGTTCGTCAGCTACTCGTTCTCCAACTTAGACGGCGACTCGGTCAAGGACTCGGCCGGTGACTCGTCCCCGATTTTGGGCGGCGGGTCGTACAACGCCGGAGACGACTTGTTCTCCTCTCAGGCTCCGCCGCCGATCTACTCCGCCGCCGGGGGATTCGCCGCGTTCTCGCCGGAGCAGAACGGGGAGGGCGTGGACGGAGGATTCGGCGCCGCCGATGGCCAGATCTTGCCGCCTCCGACGGATATGGCGGCGGAGGAAGGGTTTGCTCTGAGAGAGTGGCGAAGGCAGAACGCGATTCGATtggaggagaaggagaagaaggagaaggagatgCGGTTGCAGATCATAGAGGAAGCGGAAGAGTACAAAATTGAGTTCTACAGAAAGCGTGCGGTTAACGTTGAGAACAACAAGGCTTCTAACAGGGAAAGAGAGAAGCTATTTTTGGCAAGCCGGGAGAAGTTCCATGCTGAAGCTGACAAAAACTACTGGAAGGCAATTAGTGAACTTATTCCACATGAAGTGCCTGCAATAGCGAAGAGAGGGAAAAAGGACAAAGAGAAGAAGCCTTCTATTGTTGTAATCCAGGGCCCAAAACCAGGGAAGCCAACTGATCTTTCAAGAATGCGCCAGATATTATTGAAGCTCAAGCACAATCTCCCTCCACATATGAAGCCCAAGCCTCCCCCATCTTCAGAAACCAAAAAGGATGCCAAAACTGGACCTCCTGATGGAGCTGGCACAAGTTCTACGCCTCCCAAGGTTGTGCCTGTGTCAACTCCTGAGGCTGTTGCTGCAGCTTGA 855 0.5263 MSSSFGSSGQPFDDDGAFVSYSFSNLDGDSVKDSAGDSSPILGGGSYNAGDDLFSSQAPPPIYSAAGGFAAFSPEQNGEGVDGGFGAADGQILPPPTDMAAEEGFALREWRRQNAIRLEEKEKKEKEMRLQIIEEAEEYKIEFYRKRAVNVENNKASNREREKLFLASREKFHAEADKNYWKAISELIPHEVPAIAKRGKKDKEKKPSIVVIQGPKPGKPTDLSRMRQILLKLKHNLPPHMKPKPPPSSETKKDAKTGPPDGAGTSSTPPKVVPVSTPEAVAAA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2347 284 MobiDBLite consensus disorder prediction 196 284 - -
Ssu4g2347 284 PANTHER CLATHRIN LIGHT CHAIN 3 1 281 - -
Ssu4g2347 284 PANTHER CLATHRIN LIGHT CHAIN 1 281 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Ssu4g2347 284 Pfam Clathrin light chain 100 205 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Ssu4g2347 284 MobiDBLite consensus disorder prediction 29 50 - -
Ssu4g2347 284 MobiDBLite consensus disorder prediction 67 98 - -
Ssu4g2347 284 Coils Coil 107 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2347 Ssu-Chr4 57138647 57140677 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2347 - - aprc:113850159 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2347 4 57138647 57140677 Ssu4g2347 4 57138647 57140677 ECH