Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2333 ATGTCCGACCTCACCGAATTGCACGGAAAAGGAAGTGAGAGAAGTGAAGAGCCTTGTTCCTATGTTCCGCCTGTGCTTGGTCTTCCTTCCTTGCAGCATACTTTTGGCCACTGGGAACACTTTCTTTGTTGCACAAGCAAGGAGCTTCACACCATATACCGAAACAATGGTAATTATATCACTATTCTCCTTTTGATCAAGTACGGCGCGAAAACTTTGTCAAAACTGATCTGCACGGGTCTCAGTTTTGCATTTCGATTCAAAAGAAAAGCAAgcacatatataaaaatttgttgtgGCATTCCTTTTGCGGTAATTTGCAGCGTCATGGCATGGAAAGTTGAGATGCATAGATTGTCGATAAACAAGGAGAGGGACCTTAAACACCCAGGTAGAAACACGACTGTGGCCTTGGTTCCGCAGTTTTTCTTCTTAGGAGTGACGGAGGCACTTCTTGGTGGTGGGTTTGAGAGTTTATTCCATGACCACGTACCTAATTCGTTACGGATTTTTGAGGATTCGTTTGCTGAATTGGTGACTGATATTGTCAAACTCCTCATTGTAATACCAATTCCTTACAGTAGCTGGTTCAAGGAAACTGTCGACACTAACCGTTTGGACAGTTACTATCTAGGATTGGCAATACTGAACGCTGTGCTCTTTGTCGGTTTTGCATGCTACACCATTTTTAGATatgcatacaaaaaaaaatgtccgGAGGATGAAAAAATAACGGAGGAGCAAGCATTGGAACATGTTCATCAACCAGACTCACAGGATTCCTATCcggaaaataataatgaaacacAACCCGGGAACCAAGAGGTGGAGATGGCTGAAGTCTTGGAGGGGAATGATGATAATAACTCCTACAAGGAAAAGCTATTGATGGGCTGTTGTGGGGATGTTTCTTTTGCTATGGCACTACTAGTTTCACCAAGAATTGCAGACTCTGATGATCTCAATGATGACAATAATGTGTCACAACCATATGAAAGTAGTGAAAAGTCATGTGAGGGTGATATACCTGATAGCGAGTCATCTGGCACAGATGTGGAAGAATTGTTCAACCAAGGGCACTATCACGTGTCCCACCCTAAAGTTGACAATTTGAGCTCGGCCTAG 1125 0.4107 MSDLTELHGKGSERSEEPCSYVPPVLGLPSLQHTFGHWEHFLCCTSKELHTIYRNNGNYITILLLIKYGAKTLSKLICTGLSFAFRFKRKASTYIKICCGIPFAVICSVMAWKVEMHRLSINKERDLKHPGRNTTVALVPQFFFLGVTEALLGGGFESLFHDHVPNSLRIFEDSFAELVTDIVKLLIVIPIPYSSWFKETVDTNRLDSYYLGLAILNAVLFVGFACYTIFRYAYKKKCPEDEKITEEQALEHVHQPDSQDSYPENNNETQPGNQEVEMAEVLEGNDDNNSYKEKLLMGCCGDVSFAMALLVSPRIADSDDLNDDNNVSQPYESSEKSCEGDIPDSESSGTDVEELFNQGHYHVSHPKVDNLSSA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2333 374 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 65 229 - -
Ssu4g2333 374 MobiDBLite consensus disorder prediction 316 374 - -
Ssu4g2333 374 Gene3D MFS general substrate transporter like domains 55 240 IPR036259 -
Ssu4g2333 374 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 65 229 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g2333 374 MobiDBLite consensus disorder prediction 252 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2333 Ssu-Chr4 56450733 56453779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2333 75 239 Organic Solute Cotransporters AT3G53960 29.944 1.19e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2333 - K14638 gmx:106798051 193.741