Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2332 atgattcaGTTAGCTCTTTTAGGTAAATTAGTTCCATCTATTGTCATCGATTGTTCTATTCCCATCAAACTTTTCGTCATGGCACTGCAAGAAAACAGCTCAGAAATAAACTCTTCACCTGCTCATATCAAGAAATTCTCGCAGTCAACAATAGCTTCACTCCGTAATCTATTAGTCTTCTCAAAAACCCTACCTTTCATTGGCGGTTTGATTGTAAGCTACAAATTTGTGGAAGCCGCAGTGGTTTTTATATTGATGGATTACCTCACAGTTTCATGGGGGGAGGACAATCGACAGATAGCTATTGTTGTTACAAATGTTCAAGATGGTCTATcatctatcttttttatctttgtttctcAAATCTCAGAAGAATATACAGGTTGTTTCGCTATGATCACATATTGCGTTCCAGTTTCCATCGTgGGTTTAGTGCTACTATGGACATCTACATCACCTTCAGCATTTGGCGCGATCTATGCTGCAATAGTCCTCCTTGTACTAGGAAAAGGTGGTGAAAAGCTTTCGGAAAATTTTCTTGAATATCAGTTACAAGACCACGTGGGTACAATTTGTATCAAGATCTGTTCATTCGTTCCATCGTTTGTTGTCTATATCATGACAGTTTATATTGCCTTTGAGAGAGATGGAACGTACAAAAGCCGCTTCAGATTTGCGGCATTTCTCATGTTAGGGACTTACGCGTTATTCCTCGTTGGTTATTTGTGGTATAGTCGCGAGGAATTGCCTGTTGAAAGCAATCTACGCAAGATCTATAGAACCTGCAAAGCAGCTTTAGGGAAATGGAAATCAAAATATCCAACCTCGCCGAATTTTTATTACTGGAAGGACTATAAACAGGGCCATTTGTATGAACATGGTAAAGGTAAAGGACTAAGGTTATTGCCTCGAGTTCCACGGCTATTCAGGTGGTTGGACAAAGCAGCAATAGTTAAGTCTAGAGATCCTGAAGTGATTCCCGGGACGcaagaaaagaaagggaaacTTTGCACGGTAAAGGAAGTGAGGGAAGTGAAGAGCCTTGTTCCTATGATCTACCTGGGCTTTACCTTCTTTGGTTACAGTTTTCTTTTGGCCTCTGGGAACACTTTCTTTGTTTCACAAGCAAGCAGCGCCGTCTCAGTTATTACTAACATTGACggtaatgatatttttattctgttTTTAATCAAGGACGTCATGAATAAAATGTCACGATTCATCTGCTTTCTTATCCTACGGTGCTTGACAAAATTCGGAATTATCGATTTTATgcccaaaagaaaagaagccaCAATTATAAGGGTTGGTTTTGGCATGTTTTGTGCGGTAATTTGCTGCCTCATAGCCTGGCGAGTGGAGGTTCTTAGATTGTCACAAGACACGAACACGACAGTGACCTTAGTTccacaatttatattgttaggAATGGCAGAGGGACTTGTCGAGGGTGGGTTTACGAATTTATTCTATGGTTACGTAGCTGAATCTATGTGGAGTTTTGCGGATTCGTTTAGTGAATTGGTAATTGGTACTGGCAAACTCCTCATCACACCACTTGTCTTAATTTTCCGTAGCTGGTTCAACGGATATTACGACACTAGCCATTTGGACAGGTACTTTCTGATGTTGGGAATATTGAACTCTGCCTTCCTTCTCGTTTTTGCATACTACTCCTTCAGATATGCATACAAGGAAGTATGTCCGGTGGATGCAAAAGTTACGATGGAGCAAAGATTGGAACATGCTCATCAACCAGACTCACAGGATTCCAATCAGGAAAACAATAATGAAGCACTGGACCAAGTAATAACTAGGATCAATGAAGAACGCGctgaagatgaagatgagaaTGAAATTGTCTCAATCAGGATGATTAAAGGGGAAGGCAAACTTGaagtgtaa 1905 0.378 MIQLALLGKLVPSIVIDCSIPIKLFVMALQENSSEINSSPAHIKKFSQSTIASLRNLLVFSKTLPFIGGLIVSYKFVEAAVVFILMDYLTVSWGEDNRQIAIVVTNVQDGLSSIFFIFVSQISEEYTGCFAMITYCVPVSIVGLVLLWTSTSPSAFGAIYAAIVLLVLGKGGEKLSENFLEYQLQDHVGTICIKICSFVPSFVVYIMTVYIAFERDGTYKSRFRFAAFLMLGTYALFLVGYLWYSREELPVESNLRKIYRTCKAALGKWKSKYPTSPNFYYWKDYKQGHLYEHGKGKGLRLLPRVPRLFRWLDKAAIVKSRDPEVIPGTQEKKGKLCTVKEVREVKSLVPMIYLGFTFFGYSFLLASGNTFFVSQASSAVSVITNIDGNDIFILFLIKDVMNKMSRFICFLILRCLTKFGIIDFMPKRKEATIIRVGFGMFCAVICCLIAWRVEVLRLSQDTNTTVTLVPQFILLGMAEGLVEGGFTNLFYGYVAESMWSFADSFSELVIGTGKLLITPLVLIFRSWFNGYYDTSHLDRYFLMLGILNSAFLLVFAYYSFRYAYKEVCPVDAKVTMEQRLEHAHQPDSQDSNQENNNEALDQVITRINEERAEDEDENEIVSIRMIKGEGKLEV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2332 634 Pfam POT family 132 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g2332 634 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 75 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g2332 634 Coils Coil 597 617 - -
Ssu4g2332 634 Gene3D MFS general substrate transporter like domains 46 568 IPR036259 -
Ssu4g2332 634 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 75 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2332 Ssu-Chr4 56306811 56310217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2332 100 569 Organic Solute Cotransporters AT2G37900 25.000 1.24e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2332 - K14638 ccaj:109818666 540.806