Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2331 ATGGCACTGCAAGAAAACAGTTCAGAAATAAACTCTTCAGCTGCTCTTAAGCAGAAATTATCAGTGTCAACAATTGCTTCACTCCGTAATCTATTCGTCCTCTCAAAGACCCTACCTTTCACTGGCGGTTTGATTGTAAGCTACAAATTTGTGGACATCGCGGTCGTTTTTATATTGATGGATTACCTCACAGATTCATGGGATAGTGACAATCAACAGATAGCTGCCGTTATTACAAATCTTCAAGATGGTCTATCAtctatattttttgtcattgtttCTCTAATCTCAGAAGAATATACAGGTTGTTTCACTATGACCACATATTGCGTTCCAGTTTCCATCGTgGGTTTAGTGCTACTATGGACATCTACTTCACCTTCAGCTTTTGGTGCGGTCTATGCAGCACTAGTCCTCCTTACATTAGGGACAGGTGGTCAAAAGctttcagaaaattttcttgAATATCAGTTACAAGACAACGTGGATACAATTTGTATGAAGATCTGTTTGTTCGTTCCATCGGCTGTTGTATATATCATAACAGTTTGTATTGCCTTTATGTATGAGGGAACGTACAGGGACCGCTTCAGATTTGCGGTATTTCTCATGTTAGGCACTTATGTGTTTTTCCTCGTTGGTTCTTTGTGGTATGACCGCGGCGAATTGCCCGTTGAAAGCAATCTACACAAGATCTATAGAACCTGCAAAGCAGCTTTAGGGAAATGGAAATCAAAATATCCAACCTCGCCGAATTTTTATTACTGGAAGGATTATAAGCAGGGCCATTTGTATGAACATGGTAAGGGACTAAGGTTATTGCCTCGAGTTCCACGACTATTTAGGTGGTTAGACAAAGCAGCTATAGTTAAAACAGAAGAATCTAAACATCCTGAAGTGAGTCCCGGGACGCAAGAAGAGAATAGGAAGCTTTGCACGGTAAAGGAAGTGAGGGAAGTGAAGAGCCTTGTTCCTATGATCTACCTGGGCTTTACCATCTTCGGTTACAGTTTTCTTTTGGCCTCTGGGAACACTTTCTTTGTTGCACAAGCCAGCAGCTTGGAATCAGTTTTTACTAATATTGATGGTAATGATATCTTTATTCTCATTTTGATCAAGGACGTCATGAATAACATGTCACGATTCATCTACTTTCTTTTATTACGATGCTTGAGAAAATTCGGAGTTATCGAATTTATGCCCAGACGAAAAACAGCCACAATTATAAGGGTTGGTTTTGGCATGTTTTGTGCGGTAATTTGCTGCCTCATAGCCTGGCAAGTGGAGGTTCGTAGATTGTCAAAAGACACGAACGTTAACACGACAGTGACCTTAGTTCCACAATTTATATCTTTAGGAATGGCGGAGGGACTTGTTGAGGGTGGGTTTACCAATTTATTCTTTGGCCACGTGGCTAAATCGATGTGGAGTTTTGAGGATTCGTTTAGTGAATTGGTGATTGGAACCGGCAAACTCCTCATTACACcacttgtatttattttcagTAGCTGGTTCAACGATAATGTCTACACTACCCATTTGGACAGGTACTTTCTGATGTTGGGAATATTGAACGCTGCGTTCCTTCTCGTTTTTGCATACTATTCCATCAGATATGCATACAAGGAAGTATGTCCGGGGGATGAAAAAGTTACGCGGGAGCAAAGATTGGAATATGCTCATCAACCAGAGTCAGAGGATTCCTATCAGGAAAATGATAGTGAAGCACAGTTGGTGCGCCAAGtaaTGACTGGGATCTATGAAGAActtgatgaagatgaagatgagaaTGAAGTTGTCCCAATTCAGGTTGATTTTTAA 1821 0.3921 MALQENSSEINSSAALKQKLSVSTIASLRNLFVLSKTLPFTGGLIVSYKFVDIAVVFILMDYLTDSWDSDNQQIAAVITNLQDGLSSIFFVIVSLISEEYTGCFTMTTYCVPVSIVGLVLLWTSTSPSAFGAVYAALVLLTLGTGGQKLSENFLEYQLQDNVDTICMKICLFVPSAVVYIITVCIAFMYEGTYRDRFRFAVFLMLGTYVFFLVGSLWYDRGELPVESNLHKIYRTCKAALGKWKSKYPTSPNFYYWKDYKQGHLYEHGKGLRLLPRVPRLFRWLDKAAIVKTEESKHPEVSPGTQEENRKLCTVKEVREVKSLVPMIYLGFTIFGYSFLLASGNTFFVAQASSLESVFTNIDGNDIFILILIKDVMNNMSRFIYFLLLRCLRKFGVIEFMPRRKTATIIRVGFGMFCAVICCLIAWQVEVRRLSKDTNVNTTVTLVPQFISLGMAEGLVEGGFTNLFFGHVAKSMWSFEDSFSELVIGTGKLLITPLVFIFSSWFNDNVYTTHLDRYFLMLGILNAAFLLVFAYYSIRYAYKEVCPGDEKVTREQRLEYAHQPESEDSYQENDSEAQLVRQVMTGIYEELDEDEDENEVVPIQVDF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2331 606 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 49 535 - -
Ssu4g2331 606 Pfam POT family 113 492 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g2331 606 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 49 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g2331 606 Gene3D MFS general substrate transporter like domains 8 545 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2331 Ssu-Chr4 56278066 56280996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2331 59 546 Organic Solute Cotransporters AT3G53960 25.693 7.07e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2331 - K14638 ccaj:109818666 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2331 4 56278066 56280996 Ssu4g2331 4 56278066 56280996 ECH