Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2286 ATGGGTTCATTTGATCGATTGTTCAACCGGCAAAGAAGTCTTCATGAGATCCTTGGTGGTGGTCAGGTTGCAGATTTAATACTGTGGCGGCGGAAGAACCTTACTGTGTGGATATTGTTCGTCACACTGGCTGCTTGGGTTGTGTTTGAAAGATCTGGTTATACTCTTCTGTCTCTTGTTTCTAGTGTTCTACTCCTCCTCAttgtcattctttttctttgggCCAAGTCAGCAGCAATTCTCAACAGACCTGCTCCACCTCTACCACAGTTGCATCTGTCAGAGGAAATGGCGAACGAAGTAACAGCTTTTATCCGCACCAGAGTTAATGATCTGTTATCAGTTTCTCAAGATATTGCCCTCGGTAAAGACTCAAGGCTGTTCCTGAAAGTAGCTGCATACCTCTGGTTAATTTCTATTATTGGTGGCTTGACTGATTTCCTTACCCTGGCATACACCAGTCTTTTTATTGTTCTTACAGTACCAGCAATCTATGAAAGATATGAAGATTACATAGATATGTATGTCTTGAGGGGTTACAGAAAATTATGCATATTGCATGTGAAAATAAATGAGGAATATGTCAGCAGAGTCCACAACTGGATTCTGGAGAAGAAAAAGCTGAGATGA 630 0.4032 MGSFDRLFNRQRSLHEILGGGQVADLILWRRKNLTVWILFVTLAAWVVFERSGYTLLSLVSSVLLLLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNDLLSVSQDIALGKDSRLFLKVAAYLWLISIIGGLTDFLTLAYTSLFIVLTVPAIYERYEDYIDMYVLRGYRKLCILHVKINEEYVSRVHNWILEKKKLR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2286 209 Pfam Reticulon 23 176 IPR003388 -
Ssu4g2286 209 PANTHER RETICULON-LIKE PROTEIN B12 5 208 - -
Ssu4g2286 209 ProSiteProfiles Reticulon domain profile. 23 179 IPR003388 -
Ssu4g2286 209 PANTHER RETICULON 5 208 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2286 Ssu-Chr4 54329018 54331174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2286 K20723 - gmx:100809125 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2286 4 54329018 54331174 Ssu4g2286 4 54329018 54331174 ECH