Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2209 ATGGCCAGCGACGATCTTCGATTCTTCGAGTTGAACACAGGCGCTAAGATACCTTCAGTTGGTTTGGGCACGTGGCTCACTGAACCTGGCGTTGTTGCTCACGCCTTGGCCACCGCGATAAACGTTGGGTATCGGCATATAGATTGTGCGCAAATTTACGGCAATGAAAAGGAGATTGGTGCTGCCTTGAAGAAGTTGTTTGCTGATGGTGTAGTTAAGCGTGAAGATATGTTTATCACCTCCAAGCTATGGTGTACTGATCACTTGCCAGAAGATGTCCCAAAGGCACTGGATAGAACTTTACGGGATTTGCAACTGGACTATTTGGATCTCTACCTTATTCACTGGCCAGTCAGCATGAAAAATGGGCAGCTTACCAAACCTGACATACCTAGCACGTGGAGAGCAATGGAGGCACTCTACAATTCTGGCAAGGCTCGAGCTATAGGGGTCAGCAATTTCTCTGTAAAGAAGCTTCAGGATCTGTTGGATGTGGCACATGTGCCTCCAGCTGTTAACCAAGTGGAGTTGCATCCTTCATTACAGCAGCCAAAATTGCATGCTTTTTGTAAATCCAATGGAGTGCACTTATCAGGTTATTCACCACTGGGTAAAGGATACAGTGAAAGTCATATTCTTAAAAATCCAGTTCTGCACACGACTGCAGAGAAGTTAGGGAAGACTCCAGCGCAAATAGCTCTTAGATGGGGATTAGAAATGGGTCACAGTGTACTTCCCAAGAGCACAAATGATGCTAGGCTCAAGGAAAACTTTGATCTGTTTGATTGGCCTATACCTGCAGATTTGCTTGCCAACTTCTCTGACATTGAGCAGGAGAGAATAGTTGCTGGAGATGGTTTTGTTGGCAAGAGATCTGCTGGCTACAAAACAACTGAAGAACTCTGGGATGGTGAGTAA 918 0.4564 MASDDLRFFELNTGAKIPSVGLGTWLTEPGVVAHALATAINVGYRHIDCAQIYGNEKEIGAALKKLFADGVVKREDMFITSKLWCTDHLPEDVPKALDRTLRDLQLDYLDLYLIHWPVSMKNGQLTKPDIPSTWRAMEALYNSGKARAIGVSNFSVKKLQDLLDVAHVPPAVNQVELHPSLQQPKLHAFCKSNGVHLSGYSPLGKGYSESHILKNPVLHTTAEKLGKTPAQIALRWGLEMGHSVLPKSTNDARLKENFDLFDWPIPADLLANFSDIEQERIVAGDGFVGKRSAGYKTTEELWDGE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2209 305 PIRSF AKR 3 297 IPR020471 GO:0016491
Ssu4g2209 305 Pfam Aldo/keto reductase family 22 272 IPR023210 -
Ssu4g2209 305 PANTHER ALDO/KETO REDUCTASE 3 304 - -
Ssu4g2209 305 CDD AKR_AKR4C1-15 7 282 IPR044498 GO:0016491
Ssu4g2209 305 SUPERFAMILY NAD(P)-linked oxidoreductase 9 279 IPR036812 -
Ssu4g2209 305 ProSitePatterns Aldo/keto reductase family signature 1. 43 60 IPR018170 GO:0016491
Ssu4g2209 305 PRINTS Aldo-keto reductase signature 171 200 IPR020471 GO:0016491
Ssu4g2209 305 PRINTS Aldo-keto reductase signature 212 236 IPR020471 GO:0016491
Ssu4g2209 305 PRINTS Aldo-keto reductase signature 99 117 IPR020471 GO:0016491
Ssu4g2209 305 PRINTS Aldo-keto reductase signature 39 63 IPR020471 GO:0016491
Ssu4g2209 305 PRINTS Aldo-keto reductase signature 137 154 IPR020471 GO:0016491
Ssu4g2209 305 ProSitePatterns Aldo/keto reductase family signature 2. 137 154 IPR018170 GO:0016491
Ssu4g2209 305 ProSitePatterns Aldo/keto reductase family putative active site signature. 245 260 IPR018170 GO:0016491
Ssu4g2209 305 Gene3D - 6 305 IPR036812 -
Ssu4g2209 305 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 3 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2209 Ssu-Chr4 51602669 51606557 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2209 K00002 - gmx:100809492 545.043