Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2195 ATGGTCGTTGCCACCATGGCATGGCGTCACAAGGCGGTGCCGGAGGCGAACACTCTCGGCATCCTCGCCTTCGACGCCGGAAAAACCATGTGCCGCCTCATCTCCCTCTACCACTCCGTCTCCGACGAAGAAATCACCAAGCTCCGCACCGAGGTGATCAAATCCAAAGGGGTAACATACTTGAATTCCCAACATGAGTGCTTCCTCCTCAACCTCGCCGCCGCGGAGCGCCTCGAGGAGCTCGACGTGGCCGCCCACACCGTTTCACAGCTCGGCCGGAAGTGCTCAGACCCCGCCCTCGCCGGCTTCGACCTCGTCTACGCCGACCTCAAGCTCGGCCTCATCGACCTACGCAAAATGAGTTACAATTGTCGCAACACCCCAAAGATAGTCTCCAAACTGGAGAAGCTTGTCTCTTCGACCAGAAGTCTCCACGCCGCCATGGAATCTATGGCGGAATTGGAGGCTTCTGAAAAGAAGAGACAACGCTGGAAGACTGCAGGAGCCgctaataattataacaactacccAAAACAAAACTTAGAATACTTGAACGAGCAGATAGCGTATCACGGGAAACAAGTGCAGCATTACAAGGAAGTTTCACTGTGGAATCAAACATTGGACAAAACCGTTGGGATCATGGCTAAGGTAGTTTGCATTGTCTACGCTAGAATATGTTCTGTTTTCGGAGCCTACGTTACCAACTGCAACTGCTATAACGGTGACAACGACAGTAACAGCAATAACTGTTGTTGCCTCTTAGAACACCGCGAGTTGTACAAGAAAAATTGCTTTCTCTACGAGGAACCACTTCACAAGCGTGTCACAAAATCGGGTCCTATTCCCAAGGCTAATAACAAAACCGGGGTGATCCGGTTCTTGAACCATGACCGTGAAGTCGGTAGGCCAATGAGTAATGTTAACAACAGGGTTTTGAGGCTGGCGCCGCCGTCGACGGTGGGCGGGGCGGGGCTGGCGGCGAGGTACGCGGAGGTGGTTTTGTTTGCGGAGCGGTGCCTGCACGGGCCGGCGACGGTGGGGGAGGACGCGCGGGAGGCGCTGTATGAGATGTTGCCGGAGAGGATGAGGCGGAAGGTGGGGGCGAAGCTGAAGGGCCGCTGGCGGAGGGAGGAGGAGGGGGAGGCGCTGGCGGAGGGGTGGCGGGACGCGGTGGAGGAGCTCTTGGAGTGGCTGTCGCCGGTCGCGCACGACACCGTGCGGTGGCAGGCGGAGAGGCTCATGGAGAAGGCAAGGTTTGAGACGAAGACGACGGCGCTGCTGCTGCAGACGCTGCATTACTCCGACTTGGAAAAGGCGGAGGCGGCCATTGTGGAGGTGCTGGTGGGTTTGAGTTGCATATATTGGTGTGAGAAAAGATAA 1383 0.5568 MVVATMAWRHKAVPEANTLGILAFDAGKTMCRLISLYHSVSDEEITKLRTEVIKSKGVTYLNSQHECFLLNLAAAERLEELDVAAHTVSQLGRKCSDPALAGFDLVYADLKLGLIDLRKMSYNCRNTPKIVSKLEKLVSSTRSLHAAMESMAELEASEKKRQRWKTAGAANNYNNYPKQNLEYLNEQIAYHGKQVQHYKEVSLWNQTLDKTVGIMAKVVCIVYARICSVFGAYVTNCNCYNGDNDSNSNNCCCLLEHRELYKKNCFLYEEPLHKRVTKSGPIPKANNKTGVIRFLNHDREVGRPMSNVNNRVLRLAPPSTVGGAGLAARYAEVVLFAERCLHGPATVGEDAREALYEMLPERMRRKVGAKLKGRWRREEEGEALAEGWRDAVEELLEWLSPVAHDTVRWQAERLMEKARFETKTTALLLQTLHYSDLEKAEAAIVEVLVGLSCIYWCEKR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2195 460 Pfam Protein of unknown function (DUF668) 320 408 IPR007700 GO:0045927
Ssu4g2195 460 PANTHER OS10G0380300 PROTEIN 12 460 - -
Ssu4g2195 460 Pfam Domain of unknown function (DUF3475) 21 76 IPR021864 GO:0045927
Ssu4g2195 460 PANTHER BNAC09G50660D PROTEIN 12 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2195 Ssu-Chr4 51047779 51049161 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2195 - - gmx:100796635 719.153