Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2188 ATGGCAAACCAAACGACAACAACAGCTCCTCCTGCGTTCTCTGCTTCGCTCTCCTTCTCTTCTGGGTCTCCCGTTCACGCGCCTCTGAAGCGCGTGGGCACGCACAATGGAAGCTTCCACTGCGACGAGGCCCTTGGCTGCTTCATGATTCGCCTCTCTCACAAATTCAACAATGCTGAAATCGTTCGCACCCGAGACCCTCAGGTGTTGGAGGGTCTTGATGCTGTTCTTGATGTTGGGGGAGTGTATGACCCTGCCCGAGATCGGTATGATCATCATCAAAAGGGATTTGAAGAAGTTTTTGGGCATGGTTTCTCTACTAAATTGAGTAGTGCTGGTCTTGTTTATAAGCATTTTGGAAAGGAGATTATAGCCAAAGAACTTAAGGTAGATGAGAAACACCGAGATGTGCATCACATATATTTGGCTGTTTACAAGAGCTTCATGGAGGCAATTGATGCTATAGACAATGGAATCAATCAGTATGATACAGACCAGCCTCCAAAATATGTGAATAATACTCATTTATCCTCAAGAGTTGGAAGGATAAATTTGGATTGGACAGATCCTGATCAGTCACctgagaaagaaaatgaggccTTTCAACGTGCCATGGCTCTTGCTGGCAATGAGTTTCTGGATAGTGTTCGATTTCATGTAAATTCATGGTTACCAGCAAGGTCAATTGTAATGGAGACCCTAGTGGCTAGACAGACTGTTGATCCTAGTGcagaaattttagttttgacTGAATTTTGTCCCTGGAAGCTTCACTTATTTGAGCTTGAGGGGGAGATGAAAATTGACCCTCCAGTCAAATATGTTCTATATCAGgACGAAAGAAGCAAACACTGGCGAGTGCAGGCAGTTGCAGTATCTCCTGACAGGTTTGAGAGCCGAAAGGCTCTACCCTCACAGTGGCGAGGGTTAAGGGATGAAGAACTGTCAAAGGAGTCTGGCATTCCTGGCTGTGTTTTTGTGCATATGAGCGGATTTATTGGTGGCAACCAAACCTTTGACGGAGCCTTGGCCATGGCGAAGGCTGCTTTGAAGATGTAG 1059 0.4429 MANQTTTTAPPAFSASLSFSSGSPVHAPLKRVGTHNGSFHCDEALGCFMIRLSHKFNNAEIVRTRDPQVLEGLDAVLDVGGVYDPARDRYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEIIAKELKVDEKHRDVHHIYLAVYKSFMEAIDAIDNGINQYDTDQPPKYVNNTHLSSRVGRINLDWTDPDQSPEKENEAFQRAMALAGNEFLDSVRFHVNSWLPARSIVMETLVARQTVDPSAEILVLTEFCPWKLHLFELEGEMKIDPPVKYVLYQDERSKHWRVQAVAVSPDRFESRKALPSQWRGLRDEELSKESGIPGCVFVHMSGFIGGNQTFDGALAMAKAALKM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2188 352 PANTHER METAL DEPENDENT HYDROLASE - RELATED 19 351 IPR003226 -
Ssu4g2188 352 Pfam Uncharacterised protein family (UPF0160) 32 350 IPR003226 -
Ssu4g2188 352 PANTHER METAL-DEPENDENT PROTEIN HYDROLASE 19 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2188 Ssu-Chr4 50690515 50703283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2188 K25877 - gmx:100800706 629.017