Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2185 ATGGAAGCACTTAATGTTCCTATGGCAGACACACCGGTAGTAACATTCTGGGAAGGGGAGATTGTTGATACAAAGAATTATACTTTCTTCACTGGCAAATGGGAGGCAGCTCCAGACAATGATATAAGGCACTGGTCTAAATTTCCATCTTTTTCTCCCTTATTGGGCCAAGTGGAGGTTGATGGTGGCAAGTCTTTGGACCTGAGCAACTATCCTTACATATTCATGAGATGGAAGGAGCAGTACTTTGTGAATGTTGGAACTGACTGTGGGTTAACTATAGCCGGATTTTACTACATTTGTTTCTCTTGCAGCGATGGCTCTATCAGTGGATTCTATTATGACCCCAATAGCAGCCCTTACCAGAAGCTTGAGTTGAAATCCACCAATGATGGAAGATCTGGTTTCAGTTTTTCATCATATGAGTTGCAATAG 435 0.4207 MEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEAAPDNDIRHWSKFPSFSPLLGQVEVDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYICFSCSDGSISGFYYDPNSSPYQKLELKSTNDGRSGFSFSSYELQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2185 144 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 1 144 - -
Ssu4g2185 144 Pfam Vacuolar import and degradation protein 4 128 IPR018618 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2185 K23335 - gmx:100796349 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2185 4 50529508 50531233 Ssu4g2185 4 50529508 50531233 ECH