Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2183 ATGGAGCTTTCGCAAAATGACCACAAACATTCTGTCAGCACCAAAGCCTCCAAGTTGCCCCTATTGAATGGGATAACTCACCTCAACTCGCTCTCCGAAACTCGGTATTTGGGCAACATCGATCCTTCGAGAGCTTTCGTCACCAAAGTGAAGCGTCTCATTATAAAGGTTGGAACAGCTGTTGTTACTAGAAGTGATGGAAGATTGGCACTGGGCAGAATTGGAGCTCTCTGTGAGCagCTTAAAGAACTTAGCAGTCAAGGATATGAAGTCATATTGGTAACTTCAGGTGCTGTTGGTCTTGGCAAGCAAAGACTTAGATATCGCAAATTGGCCAATAGCAGCTTTTCTGATCTTCAAAAGCCACAAGGTGAGCTTGATGGAAAAGCATGTGCGGCTGTTGGGCAGAGTAGTCTCATGGCTCTCTATGATACCATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGGTTTTTCAGGGATGCTGGCTTCAGACAACAACTTTCAGACACGGTGAACTCATTGTTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTTCTGGTATTTTCTGGGACAATGACAGTTTGGCTAGTCTATTAGCCCTTGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTATAGTGGTCCTCCTAGTGACCCAAACTCCAAgttgatccatacatatataaaagagaaacatCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTGGGCAGAGGGGGTATGACTGCTAAAGTTAATGCTGCTGTTTGTGCTGCTTATGCTGACATCCCGGTCATTATTACTAGTGGCTATGCTACAAACAACATCATACGAGTGCTTCAAGGGGAAAGAATAGGTACTGTCTTTCATAAAGATGCTCATTTATGGACCAATATAAAGGAAGTGAGTGCACGTGAAATGGCAGTTGCAGCACGTGAAGGTTCTAGACGACTTCAGGTCCTCAAATCTGAAGAAAGGAGGAAAATATTGCTGGCAATTGCTGATGCATTGGAGAAAAATGAAAGTACAATAAGGCTTGAGAATGAGGCTGATGTTGCCGATGCTGTGGCTGCTGGATATGAAAAATCCTTGATATCACGTTTAACCCTGAAGCATGAGAAGATCTCTAGTCTTGCAAAGTCTGTGCGCATGCTAGCAGATATGGAAGAACCAGTcggtcaaattttaaaaagaactgAGCTAGCAGACAAACTCATCCTGGAGAAAATATCATGTCCTTTGGGTGTCCTTCTGGTTATATTTGAGTCTCGACCTGATGCCCTTGTTCAGATAGCTGCATTGGCAATTCGAAGTGGGAATGGTTTACTGCTTAAAGGTGGAAAGGAAGCCGGACGATCAAATGCGATCTTACACAAGGTCATTACTTCAGCGATGCCAGATACTGTTGGTGACAAACTTATTGGCCTTGTGACTACAAGAGATGAAATTCCAGACTTACTTAAGCTTGATGATGTGATAGATCTAGTGGTACCTAGAGGCAGTAATAAGCTTGTTTCTCAAATCAAGGAATCAACAAAAATTCCTGTTCTTGGTCATGCTGatGGAATTTGTCATGTATATGTCGACAAATCTGCTAATATTGATATGGCAAAGCAGATTGTTAGGGATGCAAAGACTGATTATCCTGCAGCCTGCAATGCAATGGAAACTCTTATTGTACACAAGGATCTGTCAAATAATGGTGGACTTAATGAGCTTATCCTTGAATTACAACGTGAAGGTGTTAAATTGTATGGTGGACCAAGAGCCAGTGGCTTACTAAACGTTGCTGAAACGAGCTCTTTTCATCACGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTATTTGCTGCCATTGACCACATAAATCGACATGGAAGTGCTCATACTGAATGCATTGTTGCAGAAGATTGTAAAGTTGCTGAGACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTATTCCACAATGCAAGTACACGGTTTTGTGATGGAGCACGCTTTGGGCTTGGTGCAGAGGTTGGAATAAGTACTAGTCGAATTCATGCTCGAGGTCCTGTAGGAGTTGAGGGGTTGTTGACAAACAGATGGATATTGAGAGGGAGTGGGCATGTGGTTGATGGCGATCAAGGGGTCAATTACACTAACAAAGAGCTACCGCTAAAAGCATAA 2262 0.4169 MELSQNDHKHSVSTKASKLPLLNGITHLNSLSETRYLGNIDPSRAFVTKVKRLIIKVGTAVVTRSDGRLALGRIGALCEQLKELSSQGYEVILVTSGAVGLGKQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDAGFRQQLSDTVNSLLDLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLASLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYIKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAYADIPVIITSGYATNNIIRVLQGERIGTVFHKDAHLWTNIKEVSAREMAVAAREGSRRLQVLKSEERRKILLAIADALEKNESTIRLENEADVADAVAAGYEKSLISRLTLKHEKISSLAKSVRMLADMEEPVGQILKRTELADKLILEKISCPLGVLLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAGRSNAILHKVITSAMPDTVGDKLIGLVTTRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANIDMAKQIVRDAKTDYPAACNAMETLIVHKDLSNNGGLNELILELQREGVKLYGGPRASGLLNVAETSSFHHEYSSLACTVEIVEDVFAAIDHINRHGSAHTECIVAEDCKVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDQGVNYTNKELPLKA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2183 753 Pfam Aldehyde dehydrogenase family 327 591 IPR015590 GO:0016491
Ssu4g2183 753 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 643 664 IPR020593 GO:0004350|GO:0006561
Ssu4g2183 753 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 548 694 IPR016163 GO:0016620
Ssu4g2183 753 CDD ALDH_F18-19_ProA-GPR 332 732 IPR000965 GO:0004350|GO:0006561
Ssu4g2183 753 Hamap Glutamate 5-kinase [proB]. 51 320 IPR005715 GO:0005737|GO:0006561
Ssu4g2183 753 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 24 753 - -
Ssu4g2183 753 ProSitePatterns Glutamate 5-kinase signature. 268 285 IPR019797 GO:0004349|GO:0006561
Ssu4g2183 753 SUPERFAMILY ALDH-like 331 735 IPR016161 GO:0016491
Ssu4g2183 753 Hamap Gamma-glutamyl phosphate reductase [proA]. 330 736 IPR000965 GO:0004350|GO:0006561
Ssu4g2183 753 TIGRFAM proB: glutamate 5-kinase 51 327 IPR005715 GO:0005737|GO:0006561
Ssu4g2183 753 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 24 753 - -
Ssu4g2183 753 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 338 725 IPR000965 GO:0004350|GO:0006561
Ssu4g2183 753 PIRSF P5C_synthetase 2 753 IPR005766 GO:0003824|GO:0006561
Ssu4g2183 753 SUPERFAMILY Carbamate kinase-like 51 316 IPR036393 -
Ssu4g2183 753 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 44 752 IPR005766 GO:0003824|GO:0006561
Ssu4g2183 753 Pfam Amino acid kinase family 51 296 IPR001048 -
Ssu4g2183 753 Gene3D - 41 323 IPR036393 -
Ssu4g2183 753 PRINTS Glutamate 5-kinase family signature 88 102 IPR001057 GO:0005524|GO:0016301
Ssu4g2183 753 PRINTS Glutamate 5-kinase family signature 211 238 IPR001057 GO:0005524|GO:0016301
Ssu4g2183 753 PRINTS Glutamate 5-kinase family signature 132 160 IPR001057 GO:0005524|GO:0016301
Ssu4g2183 753 PRINTS Glutamate 5-kinase family signature 270 290 IPR001057 GO:0005524|GO:0016301
Ssu4g2183 753 PRINTS Glutamate 5-kinase family signature 172 193 IPR001057 GO:0005524|GO:0016301
Ssu4g2183 753 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 339 734 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2183 Ssu-Chr4 50492427 50505014 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2183 K12657 - gmx:100797414 1320.45