Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2176 ATGTTCCAGATCGAGATGGAGGCGGATATTCAGAACCCATCTCAAGGTTACAGATTCTGCGTTGATGGAGTGCACGAGACCAACATTATTGAAtggaacaagaaaagaaaattacagaGTGATCAATTGGATTTCCTTAGACCAAAGCATAGATGCTGGGTTGGGAATTCCTCTTCTGAACATGctttaatatttgacaaaaatCCAGCATTAGAGAGCATGCAGATTTATGTCCTTAAGGGTAGAGCAGATGCAGACAGCTCGGAATCTGAATCTGTCAAAGACATCAATAGTTTCTCCGAAGATTCTATTACTGTCAATTCTGTAAATGAAGAAGGTAAACTTGTTGCCGATTCTGCAAAGACATACCAATATGGGAGGCCTTCCGCTTCTTTGGTTGGTTGGGATGGCTATAATGTCAAGGATAATCACTACTCTTTAGATGAATCTGTAGTTGATAAGGGATGCTCAGGTGAAGCAGAAACATCTGTTGACAAAGAATGTAATCCATCTTATCATTATGCTGATTTACAGGCTCTGAAGAATCTTGAGCAGCagattttagaaatagaaagCCGCAGCGATCATGTGTACCGAGAATATGCTAAAGATAGTACTGAGGAGTCCATAGATATGGAAATTGAAGATCTTTTCTCTAATGGTGAAAATCGTAACATGTATGTCCTTTCATCTGGAAGATGGAATGTAAACCAAGAGGCTCAATCAAGCACGACGCCACCAACAATTGATCAAGAATTTGAGCAGTACTTTTCCATGCTTATGCTTTAG 789 0.3764 MFQIEMEADIQNPSQGYRFCVDGVHETNIIEWNKKRKLQSDQLDFLRPKHRCWVGNSSSEHALIFDKNPALESMQIYVLKGRADADSSESESVKDINSFSEDSITVNSVNEEGKLVADSAKTYQYGRPSASLVGWDGYNVKDNHYSLDESVVDKGCSGEAETSVDKECNPSYHYADLQALKNLEQQILEIESRSDHVYREYAKDSTEESIDMEIEDLFSNGENRNMYVLSSGRWNVNQEAQSSTTPPTIDQEFEQYFSMLML 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2176 262 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 1 7 262 IPR037766 GO:0009639
Ssu4g2176 262 Coils Coil 180 200 - -
Ssu4g2176 262 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 1 7 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2176 Ssu-Chr4 50058271 50060685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2176 - - vun:114165838 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2176 4 50058271 50060685 Ssu4g2176 4 50058271 50060685 ECH