Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2168 ATGGCGGATTCGTCCCGGAGAACCGTGCTCGTAACCGGAGCTGGTGGTCGCACGGGgcaaattgtttataaaaagttaaaagagaGGCCAAACCAGCATGTTACCAGAGGCCTTGTTAGAACAGAAGAAAGCAAACAGAAAATTGGTGGTGCAGATGATGTTTTTGTTGGGGATATCAGAGATGCTGGAAGTATTACTCCTGCATTTCAAGGTATAGATGCTCTCATAATTCTCACAAGTGCAGTACCACAAATGAAGCCTGGGTTTGATCCAACAAAAGGTGGAAGACCTGAGTTCTATTTTGCTGATGGTGCATATCCTGAACAGGTTGACTGGATTGGGCAGAAAAATCAAATAGATGCTGCCAAGGCTGAAGGAGTGAAACATATTGTGTTGGTCGGGTCTATGGGTGGAACAAACCCTAATCATCCTCTGAACAGTTTGGGAAATGGGAATATATTGATTTGGAAGAGAAAGGCTGAGCAATATCTGGCTGATTCTGGTGTCCCATACACAATCATAAGGCCTGGTGGCTTGCTAGATAAAGAAGGAGGTCTTAGGGAATTCATTGTGGGAAAGGATGACGAGCTTCTTCAGACTGAAACCAAAGCCATACCTCGAGCTGATGTTGCAGAAGTCTGCGTTCAgGCACTGAATTTTGAGGAGGTTCAATTCAAGGCTTTTGACTTGGCATCAAAACCTGAGGGAGTAGGTACACCAACGAAGGACTTCAAGGCTTTGTTTTCCCAGATCACGTCTCGTTTTTGA 768 0.4375 MADSSRRTVLVTGAGGRTGQIVYKKLKERPNQHVTRGLVRTEESKQKIGGADDVFVGDIRDAGSITPAFQGIDALIILTSAVPQMKPGFDPTKGGRPEFYFADGAYPEQVDWIGQKNQIDAAKAEGVKHIVLVGSMGGTNPNHPLNSLGNGNILIWKRKAEQYLADSGVPYTIIRPGGLLDKEGGLREFIVGKDDELLQTETKAIPRADVAEVCVQALNFEEVQFKAFDLASKPEGVGTPTKDFKALFSQITSRF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2168 255 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 255 - -
Ssu4g2168 255 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 233 IPR036291 -
Ssu4g2168 255 Pfam NAD(P)H-binding 13 219 IPR016040 -
Ssu4g2168 255 Gene3D - 5 255 - -
Ssu4g2168 255 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 3 255 IPR044163 GO:0016491
Ssu4g2168 255 CDD SDR_a5 8 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2168 Ssu-Chr4 49709909 49713630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2168 - - cam:101512195 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2168 4 49709909 49713630 Ssu4g2168 4 49709909 49713630 ECH