Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2166 ATGGCCACTCTTCTTCTACCTCTCAACTCCTCTTCTCCCACCCCAATTCAAAATCCTAATCTCTCTTctcttaaaatcaaaatcaatcaacGCCACTCTCCTTTCCAAACCCTACGACATCATCGCACCCCATTCGTTCGTGCATTGAAGGAAGATTCGAACCCTGAAACCGTCCAAgATGGCGAGGTGAACAATTTAGGAGTCAAAGCTGCGCTGTCCATGTTGAGATTCTACAAGAGGGAAATTTCACCAATTTTGCCAAAGAGCTGTCGATACATTCCAACATGCAGTGAGTATTCCATGGAGGCTTATAAGAGATATGGAGTGATGAAGGGTACAGTTTTGACTGCGTGGCGTCTGTGTCGTTGCAACCCCCTTGGTGGGCACGGTTATGATCCACCTAGATGGTTTGGTGAGGTTAGTCCACTGGAAGATGCTGATGACTGA 447 0.4474 MATLLLPLNSSSPTPIQNPNLSSLKIKINQRHSPFQTLRHHRTPFVRALKEDSNPETVQDGEVNNLGVKAALSMLRFYKREISPILPKSCRYIPTCSEYSMEAYKRYGVMKGTVLTAWRLCRCNPLGGHGYDPPRWFGEVSPLEDADD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2166 148 Pfam Putative membrane protein insertion efficiency factor 70 133 IPR002696 -
Ssu4g2166 148 TIGRFAM TIGR00278: putative membrane protein insertion efficiency factor 73 134 IPR002696 -
Ssu4g2166 148 Hamap Putative membrane protein insertion efficiency factor [yidD]. 67 135 IPR002696 -
Ssu4g2166 148 PANTHER MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED 17 142 IPR002696 -
Ssu4g2166 148 SMART Haemolytic_2 67 134 IPR002696 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2166 K08998 - gmx:100783483 283.493