Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2146 ATGGATAAGAACATCATTTCAGACTTGGATAATTTTCTTGAAGAAGATAAGCAAAGAATGTCCACCATGGTAGACCAGCTCCAATTCCGAGACAGTCTAAGGATGTATAATTCATTAGTCGAGAGATGTTTCAAGGAATGTGTCAATACATTCTATCGGAAATCCCTGACCAAGCAAGAGGAAACTTGTGTTCTCAGATGTGCTCAAAAATTCTTGAGGCTTTCAATGCAAGTTGGCTTGAGATTTTCAGATCTCAACCAAGGAGCATCTACAACagataaagGTACAGAAAGCAAACTTGAGGGATTACAAGAAGTAATTAATTGA 327 0.37 MDKNIISDLDNFLEEDKQRMSTMVDQLQFRDSLRMYNSLVERCFKECVNTFYRKSLTKQEETCVLRCAQKFLRLSMQVGLRFSDLNQGASTTDKGTESKLEGLQEVIN 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2146 108 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B 1 93 - -
Ssu4g2146 108 Pfam Tim10/DDP family zinc finger 24 83 IPR004217 -
Ssu4g2146 108 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 7 93 IPR035427 -
Ssu4g2146 108 SUPERFAMILY Tim10-like 28 88 IPR035427 -
Ssu4g2146 108 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2146 Ssu-Chr4 47903111 47905134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2146 K17777 - gmx:100785421 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2146 4 47903111 47905134 Ssu4g2146 4 47903111 47905134 ECH