Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2137 ATGGCGGACTTGCCGGAAGATCGCCGCTACTCTTCTTCCAGTTCGAAGGATCCCGTAAACGGCAAGGACATGGAGGATAGTACATGCTCTGTTGCCAATGGTACAAGTAGCTCTTCAGCCTCAGGATTTCCTGGCAAGGGGTTGTCTAAAGTGACCACATTGCCAGCAGACATATCACATGGAGATAAATCAGAGTCAAGTTCAAGTAAGTTTAAGATGGAAAGGTCAAAAACAGAGAGGCAGAGACACCTAAGTCCTGAAGATGCAGCACAAATTTTTGATGACAAAATTCCTATACAGGAGAAGCTTAAATTATTGAACAGAATAGCTACTGTAAAAGATGATGGAACTGTAGAATTTGAAGTTCCTGTAGATGTTGAACCTGAGGCTCTTGTTACTCGATCCAAACAAGTAAATCATGTTGTTGATGATTCACTTGATGCAACAGACTTTCATTACATCCCGCCATTGAATATAGTCATGCTTATTGTTGGCACACGAGGAGATGTGCAACCATTTATTGCAATAGGCAAACGCTTGCAGGACTATGGCCATCGTGTTAGATTAGCAACCCATTCAAATTTCAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCATTAGGCGGTGATCCCAAAGTTCTTGCTGGTTATATGGTTAAAAATAAGGGCTTTCTGCCATCGGGACCTTCGGAGATACCTATTCAGCGAaatcaaatgaaagaaattattaattctcTGCTTCCAGCTTGTAAAGATCATGATATTGATTCTGATGTTCCCTTTAAAGCAGATGCAATCATTGCCAATCCCCCTGCATATGGGCATACCCATGTGGCAGAGGCACTTAAAATtccaattcatatttttttcacaatgcCATGGACGCCAACTACCGAATTCCCGCATCCTTTGTCACGTGTAAAGCAACAGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCTTTGATTTGGCTTGGAATACGAGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGTTACGACCAGTCACATATTTAAGTGGCTCACAAGGCTCTGAGACTGATATTCCACATGCATATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGATTGGGGACCAAAAATTGATGTAGTAGGGTTTTGCTTTCTTGATCTTGCGTCAAACTATGAACCACCTGAGTCCCTTGTAAAATGGCTTGAAGATGGTGACAAGCCTATTTACATTGGATTTGGTAGCCTGCCTGTAGAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCATTGGAGATCACTGGACAGAGGGGCATCATCAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCTATATACTTATTGGATAATTGCCCTCATGATTGGCTTTTCTTGCATTGCAAGGCAGTGGTTCATCATGGAGGTGCTGGAACAACAGCTGCGGGGCTTAAAGCTGCTTGCCCAACAACTATAGTTCCTTTTTTTGGTGATCAACCATTTTGGGGTGAGAGAGTACATGCTAGAGGAGTTGGTCCTCCACCTATCCCAGTTGATGAGTTTTCACTTCCCAAGTTGGTTGATGCAATAAAGTTTATGCTCGATCCCAAGgTAAAGAAACGTGCAATTGAACTTGCTAAGGCCATGGAAAATGAGGATGGAGTGACAGGAGCTGTGAAAGCATTTTTTAAGCAGCTTCCTCAAAAAAAATCAGAGCCTGATGCAGAGCCTCCACCATCTAGTTTTTTCTCTGTAAGTAGATGTTTTGGGTGTTCCTGA 1803 0.4099 MADLPEDRRYSSSSSKDPVNGKDMEDSTCSVANGTSSSSASGFPGKGLSKVTTLPADISHGDKSESSSSKFKMERSKTERQRHLSPEDAAQIFDDKIPIQEKLKLLNRIATVKDDGTVEFEVPVDVEPEALVTRSKQVNHVVDDSLDATDFHYIPPLNIVMLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKDHDIDSDVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEDGDKPIYIGFGSLPVEEPKKMTQIIVDALEITGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLHCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLVDAIKFMLDPKVKKRAIELAKAMENEDGVTGAVKAFFKQLPQKKSEPDAEPPPSSFFSVSRCFGCS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2137 600 MobiDBLite consensus disorder prediction 1 88 - -
Ssu4g2137 600 CDD GT1_Gtf-like 157 572 IPR002213 GO:0008194
Ssu4g2137 600 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2-LIKE ISOFORM X1 27 600 - -
Ssu4g2137 600 Pfam Glycosyltransferase family 28 N-terminal domain 159 302 IPR004276 GO:0005975|GO:0016758|GO:0030259
Ssu4g2137 600 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 158 570 - -
Ssu4g2137 600 MobiDBLite consensus disorder prediction 63 88 - -
Ssu4g2137 600 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 27 600 - -
Ssu4g2137 600 Gene3D Glycogen Phosphorylase B; 159 562 - -
Ssu4g2137 600 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 412 553 IPR002213 GO:0008194
Ssu4g2137 600 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g2137 600 MobiDBLite consensus disorder prediction 26 46 - -
Ssu4g2137 600 Gene3D Glycogen Phosphorylase B; 388 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2137 Ssu-Chr4 46459005 46524691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2137 72 600 Glycosyltransferase AT3G07020 79.813 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2137 K05841 - gmx:100812490 1092.41