Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1972 ATGAGCCGCCTCGCCGGCGACAAGCTCGTCGACAGCGAGAACTCCCTCGCCATCCGCTCCAAGTGGGTCTCCTCCATGGTGGACCTCGTCTGGCGCAAGCGCCGCGCCCTCATGGCGCGCTCCCTCATCCTCCCCGTCGAGAATTTCCGCTCCACCGTGTTCCCCGTCGTGTACTCCGTCAAGGCCGTGGCCTCCGGCCGCGTCGAGGCCATTCGGAAGCTCTCCAAGGCTTCCGCTGCTGCTGGTGGGAGCGCCGAGGTTGATTCCCACGCGGAGAAGCTTGTGGGGGTTTCTGATGTGGTGACTCACCTGGCGCCGTTCCTTGTTTCGTCGTTGGAACCGGCGTTGATCTATGAGGTTGGGATCAATATGCTGTATCTGGCTGATGTGCCGGGAGGGAAGCCTGAATGGGCTTCGCAATCCGTCATTGCGATTTTGACTTTGTGGGACAGGCAGGAATTTGCCTCCGCCAGAGAGAGCATTGTTAGGGCTGTGGTCACCAATCTTCATCTACTTGATCTTCACATGCAGGTATCACTGTTCAAGAGGCTACTTTTAATGGTGAGAAACCTGAGAGCAGAATCAGATCGAATGTATGCTCTAGCATGTATATGTAGAACTGCTCTTTGCGTGCACCTATTTGCCAAGGAAAGTGTACGAAGAGGGCAGAAACCTCTTCCTGGAACGGATATAGCTTCCCTTTTTGAGGATGCCAGAGTGAATGATGATCTTAATAGCATTACTAGTAAAAGTATATTTAGGGAGGAGTTAGTTGCATCTCTGGTGGAAAGTTGCTTTCAGCTGTCTCTGCCTTTGCCTGAACAAAAAAGCTCCGGCATGGAGAGCAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATGGGGCATTAAACTGGACTGAACCTGCTTTGGAAGTGGTGGAAGTTTGCCGGCCTTGTGTTAAATGGGATTGTGATGGCCGCACCTATGCGATTGACTGTTACTTGAAGTTGCTTGTCAGGCTATGTTACATATATGATACTCGGGGTGGTGTAAAAAGAGTTAAAGATGGAGCTTCTCAGGACCAAATTTTGAATGAAACTAGGTTGCAAAACTTGCAACGTGAACTTGTGAAGGACTTACGTGAGGTCAATACACCAAGAATATTGGCCCGCCTTATTTGGGCTATTGCTGAGCACATAGATATAGAAGGATTGGATCCACTCCTAGCAGACGACCCAGACGATCCTCTTAATGtcattatatcaaatattcgcAAGGTTCTTTTCAATGTCGATTCAACTGCAGAAACAACAAATAGAGTTCAAGATGTACAGGCAGTTCTTATATCTGCTCAGCGGCTGGGATCCCGCCACCCTAGGGCTGGGCAGTTACTTACCAAAGAGCTTGAAGAGTTTAGGATCAATCCTTTGGCTGATTCTGTCAGCAAGCATCAATGTCGTTTGATATTGCAAAGAATCAAATATGCTTCAAGTCATCAAGACAGTAGGTGGGCAGGGGTTACAGTAGCCAGAGGGGATTACCCTTTTAGCCACCACAAATTAACTGTTCAGTTTTATGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGATTAGTTCACAAGGCTATTCTAGAGTTATGGAGACCTGACCCCAGCGAACTAACCCTTTTGCTCACAAAAGGAGTTGATTCTACTTTACTGAAGGTTCCTCCAACTGCAATTACTTTGACTGGAAGCAGTGATCCCTGCTATGTTGAAGGTTATCATTTAGCTGATTCAAGTGATGGGAGAATCACTCTGCATTTAAAGGTCTTAAACTTAACTGAGCTTGAATTAAATCGGGTGGATGTACGTGTGGGATTATCAGGTGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGCGGCAATTGCGTGGTCTTGTTTCACAGTTCTTTACGATTCTTCTGTTTACAATGGATTCTGGATCCATGTTCCTGATAATGTTGTTCCATTCTCAGGATCCAGTGTTGTGCAGTGTGACAGTTGGTGTTTCCCACTTTGAAAGATGTGCCCTTTGGGTTCAAGTATTGTATTACCCATTCTATGGTAGTGGTGCCGTTGGAGACTATGAAGGTGACTACGCAGAAGAGGATCCTCAAATCATGAGACAGAAGAGAAGCCTAAGGCCTGAATTAGGTGAACCTGTGATTTTGAGATGTCAGCCTTATAAAATTCCGTTGACCGAGCTTCTTTTGCCACACCAAATATCACCTGTTGAGTTTTTCCGACTGTGGCCCAGTTTGCCAGCTATTGTAGAATATACTggtacatatacatatgaagGAAGTGGTTTTAGGGCTACTGCAGCCCAGCAGTATGGTGCATCTCCTTTCTTAAGTGGACTGAAATCCTTGTCTTCCAAGCCATTCCACAAAGTCTGTTCACATATTATCCGCACAGTGGCAGGGTTTGAGATGTGTTATGCTGCTAAAACTTGGCACGGTGGCTTCTTGGGCATGATGATTTTTGGTGCGAGTGAAGTGAGTAGAAACATGGACTTGGGTGATGAGACAACCACCATGATGTGCAAGTTTGTTGTTCGAGCATCCGATGCATCTGTTACTAAGGAGATTGGATCAGATCTTCAGGGCTGGTTGGATGACCTTACCGATGGCGGTGTGGAGTATATGCCTGAAGATGAAGTGAAAGTAGCTGCTGCCGAGAGGCTTCGCATATCAATGGAAAGGATAGCCTTGTTAAAGGCGGCCCAACCACGACCCAAGACTCCAAAATCTGATGGCGAAGATGAAGAGGAGGTGGAGgatgacaaaaataaagaaaagaaagatggcGAGGAAGATGAGAAAAAGAAGGGGCCTTCAACTCTATCGAAATTAACTGCTGAGGAGGCTGAGCATCAAGCTCTTCAAGCAGCAGTACTACAGGAGTGGCATATGCTCTGCAAGGATAGAACTACTGAAGTTAATTAA 2958 0.4594 MSRLAGDKLVDSENSLAIRSKWVSSMVDLVWRKRRALMARSLILPVENFRSTVFPVVYSVKAVASGRVEAIRKLSKASAAAGGSAEVDSHAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKPEWASQSVIAILTLWDRQEFASARESIVRAVVTNLHLLDLHMQVSLFKRLLLMVRNLRAESDRMYALACICRTALCVHLFAKESVRRGQKPLPGTDIASLFEDARVNDDLNSITSKSIFREELVASLVESCFQLSLPLPEQKSSGMESRVIGALAYGTGYGALNWTEPALEVVEVCRPCVKWDCDGRTYAIDCYLKLLVRLCYIYDTRGGVKRVKDGASQDQILNETRLQNLQRELVKDLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIRKVLFNVDSTAETTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRINPLADSVSKHQCRLILQRIKYASSHQDSRWAGVTVARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTKGVDSTLLKVPPTAITLTGSSDPCYVEGYHLADSSDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRGLVSQFFTILLFTMDSGSMFLIMLFHSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSGAVGDYEGDYAEEDPQIMRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAIVEYTGTYTYEGSGFRATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFEMCYAAKTWHGGFLGMMIFGASEVSRNMDLGDETTTMMCKFVVRASDASVTKEIGSDLQGWLDDLTDGGVEYMPEDEVKVAAAERLRISMERIALLKAAQPRPKTPKSDGEDEEEVEDDKNKEKKDGEEDEKKKGPSTLSKLTAEEAEHQALQAAVLQEWHMLCKDRTTEVN 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1972 985 MobiDBLite consensus disorder prediction 910 959 - -
Ssu4g1972 985 MobiDBLite consensus disorder prediction 931 952 - -
Ssu4g1972 985 PANTHER TSET COMPLEX MEMBER TSTA 658 982 IPR037501 GO:0006897
Ssu4g1972 985 PANTHER TSET COMPLEX MEMBER TSTA 1 639 IPR037501 GO:0006897
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1972 1 639 EF-hand Containing Proteins AT3G01780 85.179 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1972 - - gmx:100781324 1749.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1972 4 37669650 37677474 Ssu4g1972 4 37669650 37677474 ECH